Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3345 |
Symbol | |
ID | 6286312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3501870 |
End bp | 3502646 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642626929 |
Product | PepSY-associated TM helix domain protein |
Protein accession | YP_001900898 |
Protein GI | 187930411 |
COG category | [S] Function unknown |
COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.649992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TGTCCCATCC CCCGCTTGCG GCTGAGCCGG CCGCCAAACC GGCGGCCAAT GCTCGCCCGG CCAAGGCCAA ATCCGAACAC CCGGCCAACC GCCGCACCAC GATCGTCCGC TGGCTGCGCA AGACCCACGG CTGGTTCGGC CTGTGGGGCG CCGTGATGGG CCTGATCTTT GGCGTGTCGG GCATCTGGCT GAACCACCGC GCGGTGTTGA AGCTGCCCGT GACGCAACAG CGCATCAATA CGCAGATCGC CCTGCCCGAC CCCGTGCCCG CCACGCCCGA AGCGATGGCC GCTTGGCTAC AGCAGACGCT GAACACGCCG GAACCGGCCA CCCGCACGCG CGTGGAAAAG GCCAAGCCGG TGGCCTGGGC CGAGCGCCCG GCCAAGGGCG AAGGCGCCAA GGACGAGAAG AACGCCGACG CACCGCGCGG ACCCGCCGCC AAGCCGCTGA TGCAGCCCGA GCAATGGACC TTCAACTTCG GCGGCGCCAC CTCGCAAATC CAGGCCGAAT ACTGGGCCGG CAACCGCTCG GTAGCGATCC GCCAGACCGA TAACGGCTTC CTCGGCACGC TGATGAACCT GCACAAGGGC GTCGGCATGA CCGTGCCGTG GATTCTGCTG GTGGATACGC TGGCCGGCTG CCTGATCTTC CTGTCGATCT CGGGCCTGTG GCTGTGGGGG ATGACCACCA AGCGCCGCAC GGTCGGCTGG ACGATCTTCG GGTTGGGGAG CCTGCTGGCG ATCGGGCTGG CGATCTCGCG GCTTTGA
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Protein sequence | MTDLSHPPLA AEPAAKPAAN ARPAKAKSEH PANRRTTIVR WLRKTHGWFG LWGAVMGLIF GVSGIWLNHR AVLKLPVTQQ RINTQIALPD PVPATPEAMA AWLQQTLNTP EPATRTRVEK AKPVAWAERP AKGEGAKDEK NADAPRGPAA KPLMQPEQWT FNFGGATSQI QAEYWAGNRS VAIRQTDNGF LGTLMNLHKG VGMTVPWILL VDTLAGCLIF LSISGLWLWG MTTKRRTVGW TIFGLGSLLA IGLAISRL
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