Gene Rpic_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3236 
Symbol 
ID6286727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3381420 
End bp3382055 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content62% 
IMG OID642626812 
Producttoluene tolerance family protein 
Protein accessionYP_001900790 
Protein GI187930303 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.379777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGA AGCTTCTCCG CTCCCTGCTC GCCGGTCTCA CGCTGACGGC TGCCGTGGCA 
GCTGCGCCGG TCCACGCCCA GGACGCCGAC GCACAAGCCA CGGTCAAGAC GGCTGTGGAC
GACGTGCTCA GCACCATCAA GAGCGATCCG GAACTGCGTG GCGGCAACAT GACCAAGGTG
TACCAGCTGG TCGACCAGAA GATCGTGCCG CGCGCCGATT TCAAGCGCAC CACGCAGATC
GCCATGGGCC GTTTCTGGAA CCAGGCGTCG CCGGAGCAGC AGCAACAGAT CCAGGAAGGC
TTCAAAACGC TGCTCATCCG CACTTACGCC GGCGCGCTGT CGAATGTGAA GAACCAGACC
GTTTCGTACA AGCCGTTCCG TGCGGCTGCC GATGACACCG ACGTGGTGGT GCGTTCGACC
GTGAACAACA ACGGCGAACC AGTGGCCCTG GACTACCGTT TGGAAAAGAC GGCCGGTGGC
TGGAAGGGGT ACGACATCAA CATCAGCGGC CTCTGGCTGT CGGAGACGTA CAAGAACCAG
TTTGCCGAGG TCATCAGCAA GCGCGGCGGC GTCGCCGGCC TGGTGAGCTT CCTGAACGAG
CGCAACATGC AGCTCGAGAA GGGCCCGGCG AAGTAA
 
Protein sequence
MLKKLLRSLL AGLTLTAAVA AAPVHAQDAD AQATVKTAVD DVLSTIKSDP ELRGGNMTKV 
YQLVDQKIVP RADFKRTTQI AMGRFWNQAS PEQQQQIQEG FKTLLIRTYA GALSNVKNQT
VSYKPFRAAA DDTDVVVRST VNNNGEPVAL DYRLEKTAGG WKGYDINISG LWLSETYKNQ
FAEVISKRGG VAGLVSFLNE RNMQLEKGPA K