Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3174 |
Symbol | |
ID | 6286757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3326681 |
End bp | 3328354 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642626749 |
Product | UvrD/REP helicase |
Protein accession | YP_001900728 |
Protein GI | 187930241 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.938492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000324964 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | GTGATAGCCG TCGATGCCTG GCAGCCCGCA GATGGGCTGA CGCTTGAACC CAACGCCCTG CTTGCGGCCA AGGAGCAAGT GCGCAGCCTT GCACTGACAG CAGGCCCTGG TGCGGGCAAG ACTGAAATGC TTGCGCAGCG GGCAGACTTC CTGCTGCGCA CAGGCACCTG TTGCTATCCC AAACGAATTC TGGCCATCTC GTTCAAGGTC GATGCCAGCA GCAACCTGAA AGAGCGAGTC AAGCGACGCT GTGGTTCAGA AATGGCAGCG CGGTTTGACA GCTACACGTT TCACGCATTT GCCAAACGCA TCATCGACCG CTTTCGACCC GTCCTAACAG GGCAAGATGC TCTGGATGTC GGCTACAAGA TCGTTGAGCG AAAAGTGAAG CCGTCCCGCC AGGAAATCGA GTTTGCAGAC CTTGTTCCTC TGGCAATCAA GATCCTACGG AAGTCAGCTA TGGCGCGGAA CGCTGTCCGC CAAACCTACA GCGACGTTTT TCTCGACGAA TTCCAGGACT GCACCAACCT GCAGTACGAG CTGCTCAAGC TCGCCTTTCA AGGTACGAGC ATTCGCCTGA CCGCCGTGGG TGACACAAAG CAGAAGATCA TGGGTTGGGC AGGGGCCATG GACGGCATCT TCCAGGCTTT CGTTGCCGAT TTTGCGGCCA CACCGCTCAA CATGTACCGC AACTTTCGTT CGAAGCCGCG ACTGCTGCGC CTGCAGAACG AGATCGTTCG CAGGCTTGAC CCCTCATCTG TCATGCCCAA TGAGCAGCTT GCCGGCGACG AAGGCGAGGT ATTCGCGTGG CGCTTCGATG ACAGTCGCCA GGAAGCTGAA CATCTCGCAG AGCTGATCGA TGGTTGGATA AAGACTGAGC AGCTGCCTCC AGCAGAGATT GCAGTCCTCA TTCGCAATCA GCTTGATTTG TACGCCGATC ATCTTATGGC GGCACTGGAG GCTCGCGGCA TCCCTTACCG CAATGAGCAG CGGCTGCAAG ACATCACGGT TGAGCCTGCA GCCCGCTTGA TCGTGGATTA TCTGACATGC CTCTACGGCC AGCGCGAACC AAAAGCATGG ATTCGGCTCA TGAATCAGCT GATCCCGTTT GCTGATGAAG AGATTCAGTC GAACGCGCGC AAGGACCTTG ATCGGCTCAT CAAGCAACAA CGAAAAGAGG TGGTCATTGC CGAGTTGGTC GCAGAGCCCT TTTCAGGCTG GTGGGAGTTT GTTCGCGCCT TCCTGAAGCA GGTCAGTATC GAAACACTAG TGTCGCTTTC CCCAGACTAC GAGTCGCATG GCCGGCTGAA AGAGGTTGTC CGTGACACCA AGATCCGGAT CGAGGAATTG CTGAAACTGG AGCCTGATCT GCCTGAAGCC CTTGAGCGCT TTTCTGACGA TCAGGCAGTA CGAATCCTGA CCATTCATAA GAGTAAGGGC CTTGAGTTCG ATTCGGTCGT CATCATGGCG GTCGAAAAAG AAATCTTCTT TGGCGATCAG GACGAAAACC GCTGTGCCTT TTTTGTCGGG GTTTCTCGAG CCAAGAGGCG ACTAGTCCTT ACCCATGCAG ATCAACGGGA GCGCCCAGCA GGACATACGA GACGCTGGGA TGTGCAGCGC ACGGCTCAAA CTGAGTATTT CGGCTATGCC ATGCCGTTCG TGAGACAAGA ATAA
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Protein sequence | MIAVDAWQPA DGLTLEPNAL LAAKEQVRSL ALTAGPGAGK TEMLAQRADF LLRTGTCCYP KRILAISFKV DASSNLKERV KRRCGSEMAA RFDSYTFHAF AKRIIDRFRP VLTGQDALDV GYKIVERKVK PSRQEIEFAD LVPLAIKILR KSAMARNAVR QTYSDVFLDE FQDCTNLQYE LLKLAFQGTS IRLTAVGDTK QKIMGWAGAM DGIFQAFVAD FAATPLNMYR NFRSKPRLLR LQNEIVRRLD PSSVMPNEQL AGDEGEVFAW RFDDSRQEAE HLAELIDGWI KTEQLPPAEI AVLIRNQLDL YADHLMAALE ARGIPYRNEQ RLQDITVEPA ARLIVDYLTC LYGQREPKAW IRLMNQLIPF ADEEIQSNAR KDLDRLIKQQ RKEVVIAELV AEPFSGWWEF VRAFLKQVSI ETLVSLSPDY ESHGRLKEVV RDTKIRIEEL LKLEPDLPEA LERFSDDQAV RILTIHKSKG LEFDSVVIMA VEKEIFFGDQ DENRCAFFVG VSRAKRRLVL THADQRERPA GHTRRWDVQR TAQTEYFGYA MPFVRQE
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