| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3018 |
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| Symbol | pyrF |
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| ID | 6286972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3146081 |
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| End bp | 3146896 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642626588 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001900573 |
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| Protein GI | 187930086 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.397504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTA CCGAACAACT GGCTGCCGCC TGGCAACGCA ACAACTCCCT GCTGTGCGTC
GGGCTCGATC CTGACCCGGC ACGCCTGCCG GCGTCGCTGA CCGGCACGGG CGGAGCGATC
TTCTCATTCT GCCGCGCCAT CGTGGACGCG ACCGCCGACC TTGTCTGCGC GTTCAAGCCG
CAGATCGCCT ACTTTGCCTC GCAGCGCGCT GAAGACCAGC TCGAGCAGCT CATCAGCTAC
ATCCACGAAG CCTATCCGGG CGTTCCCGTC ATTCTTGATG CCAAGCGCGG CGATATCGGC
TCAACCGCCG AGCACTACGC CAAGGAAGCC TTCGAGCGCT ACCAGGCCGA CGCCGTCACC
GTCAGCCCGT ACATGGGTTT TGACTCGATG CAGCCGTATC TCGCGCACGC CGACAAGGGC
GTGATCGTGC TGTGCCGCAC GTCCAACGCC GGCGGCAGCG ATGTGCAGTT CCTCGAAACC
GACGGCCGCC CTGTCTATCA GGTCGTGGCC GAACGTGCGC GCGACGTGTG GAACACCAGC
GGCCAGATGG GCCTGGTGGT GGGTGCGACC TTTCCCGAAG AGATTGCCAA GGTGCGGGAG
ATTGTCGGCG ACATGCCGCT GCTGATTCCG GGCGTTGGCG CCCAGGGAGG CGACATCGAA
GCCACGGTGC GCGCCGGCCG CACGGCCGAC GGTACCGGCA TGATGATCAA CTCGTCGCGG
GCCATTCTCT ACGCGAGCAC CGACAGCGAT TTCGCCGATG CCGCTCGCCG CGTGGCGCTT
GCCACCCGAG ACCAGATCAA CCAGTTCCGC AACTGA
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| Protein sequence | MRFTEQLAAA WQRNNSLLCV GLDPDPARLP ASLTGTGGAI FSFCRAIVDA TADLVCAFKP
QIAYFASQRA EDQLEQLISY IHEAYPGVPV ILDAKRGDIG STAEHYAKEA FERYQADAVT
VSPYMGFDSM QPYLAHADKG VIVLCRTSNA GGSDVQFLET DGRPVYQVVA ERARDVWNTS
GQMGLVVGAT FPEEIAKVRE IVGDMPLLIP GVGAQGGDIE ATVRAGRTAD GTGMMINSSR
AILYASTDSD FADAARRVAL ATRDQINQFR N
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