| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2894 |
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| Symbol | |
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| ID | 6286908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3003649 |
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| End bp | 3007929 |
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| Gene Length | 4281 bp |
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| Protein Length | 1426 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642626464 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_001900449 |
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| Protein GI | 187929962 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3164] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02099] conserved hypothetical protein TIGR02099 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCC CGTCCCAGCC CCCAGAATCG CCGAAGTCCG ATGGTGGACA CGCCAGCACC
CTGTCCACAC GCGGGGGGGG CCGGCCCACG GCCTGGGCAT GGCTGGTACG GCTTGCCCGC
CGGGTCGGCG CGGGCATCGG GGCTGCTTTT CGCGCCCCGA TCTGGCGCAA GCTGTGGCGG
GTGCTCTGGA AGACGGCCGC CGCGCTGGCC GTCTTGGCCG TCGTCGGCAT GCTGGCGGTG
CGCTTCATCC TGTGGCCGCG CGCGAGCGTG GCACGCGAAT GGATGCAGCG CGAGGCGTCC
AGCGCACTGC ACGCCACGGT GGACATCGGC TCGCTTGAGA CCTACTGGGA GGGCTGGCAC
CCGGCATTCC GCGCCCAGCG CATCGACGCG CACGACACCG CGGGCCGCCG CACCTTCGCG
ATACAGGACG TGCAGGCGCG GCTGTCCTGG CGCTCGTTGC TGCGCATGCA GATCACCTTT
GCCGCCCTGC ACGCCAGCCA GGCCGACGTG CTGGTACGGC GCGATACGCA GGGCGCCCTG
CTCGTCGCCG GCATGCCGCT CGGCCCCGAC ACCGGCGGCG ACAGCAATTT CCTTGATCAG
TTGCTCTCCC AGGGCGACAT CGATTTCCAG CAAGGCGCCG TCCGCTGGCT TGACGAACAG
CAGAAGCTGC CTGAAGTGGC GCTGGGCAAT GTGCGGGTGC AGCTACACAG CGGCCCGACG
CGCCACCGGC TGGAGGCCAG CGGAACCTCG GCCACGCTGT TCAACGGTCC CATCAAACTG
CACGCCGATT TCCGTCACGA CCTGCTCGCC CGGCCCGGCG ACTGGCGCCA CTGGCACGGC
CAGGCCTCCT GGCAGGTCGA TACGCTGCAG TTGGCTGCCG TGCAGCGCTA CGTGCCCGTG
CTGGCCGCCG CCAAGAGCGG CACGCTCACC TCCGACGGCT CGGTGGAGTT CGCCGGCGGC
GTGTTCACGC GCAGCCAGGC ACGCCTGACC GGGCAACAGC TTGATCTCCA GGTCCGCAAG
GATCTGGACC CGCTGCAGTT GCGCAGCCTC CAGGCGCTGG CCACGCATCA GCGCAACGCG
CGAGGCGAGC ACGCCTTGCG CCTCGACACG CTGCTCTGGC AACCGCTGAA CCCGCCCGCC
CAACCGCCGT CGGTACCCGA ACTGGCAGGC CCCGGCATCC AGGCGCCGAC CAACCCGGCT
GGCACGCCGC GCGGCGTGCG CAATGTCACC GTCGGGTGGG CGCTCGACGC GCGCGATGCG
CTGCGCAGCC TGCAGGTCAA GGCCACGACA CTGGATTTGG CCGACCTGCG CAACATCGCC
ACCGCGCTGC CGCTGCCCGC CGGCGTGCTC GAACCACTGC GGACAAAGCA GCCGTCCGGC
CGCATCGACG ATCTGGACAT CAACTGGCAG CGCGATGTCT CCCGCTGGCG GCCAAATACG
CCGGCGCCGG TGCACTTCAC CGGCCGCGCC ACGATGCGCC AGGTCTCGTT CGGCCCCGGT
GCGCTGCCCG CGGTACCGCC GGGCCAGCAT CCCGAGCCAG CCGTGCCCGG CGTTGAAAAC
CTCTCCGGCA ACGCCGTCTT CTCCGACGAC AAGGGCACGC TGCGCATCGA GTCCAACGAC
ACCGCCCTAC TGCTGCCTGG CACCTTTGCC GACGCGCGCG TGCCGCTGGA CCGGCTACAG
GGCACGTTCA ACTGGACATA TCGCAAGCAG GAACTGGTTG TCGCCAGCGA CAACCTCGCG
TTCTCCAACG ACGACCTGTC AGCGCGTATC ACGGGCAGCT ATCGCCACGC GCCAGACACC
AGCCATCTCG GCACCATCGA CCTGAAAGGC ACGCTCGACC GTGCCAACGT TCCGCGTGTG
CCGCGCTACC TGCCGCTGTC GATCGGACAG CATCTGCGCG ACTACCTGGG CGGTGCGCTG
CAAGCCGGCA CGGCGAATAA CGTCGGGTTC GCACTGGCAG GTGATCTGCA CGACTTTCCG
TTCCGTCCGC CGCACAAAGG TGTCTTCCGC GTGGAAGTGC CGATCCAGGA CGTAACTTAC
CAATCAGCGC CGGCCGAAGC CGGGCACAAC CTGCCGGGCC GCGTGCCCAC GCACCCGGGC
GACTGGCCGG CGTTCACCAA CATCGACGGG ACAGTGATCT TCGATCGCGC GTCCCTGGCC
TTCAAGGTTG CGCGCGCCAA GGTGATGGGT GTGAACTTGC AGGACGTGAA TGGCAGGCTG
CCCGACATGG GCGACCACAA CCCGCTACTC ACCATCGAGG GCCGCGGCGA CGGCGCCACG
CAAAACTTCC TGCAATACGT TGAGGCCAGC CCCATCGGCC AGTGGATCGG CCACTTCACC
AAGGACGCGC GCGCCCAGGG CAACGCCACG CTGGCGCTCA AGCTGGACCT GCCGCTGCAC
GAGATGCATT CGACGCGCGC CCAGGGCAGC GTCACGTTCC TGCGCAATGA CGTCACGCTG
GTTCCGCAGG CGCCGCCGCT CACCGATGTC AACGGCGCGC TGACCTTCAC GCAAAAAGGC
ATCGGTTTCG ACAACCTGCG CGCGCGCTTT GCCGGCGGCG AAATCCGCCC CACGGGTGGC
ACCGCGCCCG ATGGCACGAT CCGCATCCAG GTGGCGGGCA CCGCATCGGC ACAAGGGCTG
CGTGAGACGA CGCCGGAAAA CAGCCCGGTG GCCGCCGTTG CACGCTCGCT GGAGGGCAGC
GCGCCTTACA GCGCGACCAT CAGCGTCAAG CAGCATCGCC CGCTCATCCA GGTGCAGTCC
GACCTCACGC CGATGACGGT GCGTCTGCCG GCGCCGCTCA ACAAGGCCGC CGGGCAGCCG
TTGCCGGTGC GTTTCGAGAT GCAGCCGCTG GCTTCCAACA ACGCCATCGA CGAAATCGTT
TTGCAGGTCG GCAATATCGT CAGTGCGCGC TACGAGCAAC GCAGCACGGG CAACGGCGTC
GAGGTGCTGC GAGGCGGGAT CGGCGTGCGG CAACCGGTGC CGCAACCGCA GGAGGGCGTG
CAGGCCAACC TGGCGCTGGA TCAACTGGAC ATCGACGCCT GGCGCCATGT CTTTGCCGCA
CCCGCCGCAG ACAAGAGCGC CGGCCAGATT GCCGCCGAAC ATGCCACCAA TGCTCCAAAC
GCCTCCGACA GCCACAGCGC GTATCTGCCC AGCCACCTGA GCGCCCGCGC GCAAACGCTG
CGCATCCTGG GCCGCGACTT CAACGCCGTG CGCATCGATG CGACGCGCGA CGGCCCCAAC
TGGCAATCGA CCATCGATTC GCGCGAGATT GCAGGCAGCG CGCGCTGGCA CGCCGAAAGC
GCCGCCGTGC CCTTCGGCGA GCTGACGATG CGCCTGTCGC GCATGAGCAT CCCAGACGCC
AAGGAAGAGA CGGCGCTCAC CGAATCGCTG GCCAGCAGCT CGCAGGAAAT TCCATCGCTC
GACCTCGTCG CCGACAAATT CGACCTACGC GGCAAGGCGC TCGGCAAGCT GGAGATCAAG
GCGCGCAGCC AGATCACCGA CGGTGCGCCG GTGTGGACGC TCGAAACGCT GAAGATCGAG
CAGCCTGCTG CCACGCTCAC GGCCCACGGT ACGTGGCGCA TCCCGCGACG CCTGCGCGGC
GGCGGTGATG ATCCCGAGCG CCGGACGTTG CTCGACTTCA ACCTGGATCT GCGCGACACC
GGCGAGCTGC TGCAAAAAAT GGGCTTCGCC AAGGTGATCG ACGGTGCCAA GGGCAAGCTC
GAAGGCCGCG TGGTCTGGCG CGGCTCGCCC ATGTCGATCG ACTACCCGAC GCTCAACGGC
CGCATGGCGC TGAACCTGGA GCGCGGCCAG TTCCTCCCGG TCGATCCGGG CCTGGCCAAG
CTGGCGGGCG TGCTGAGCCT GCAGGGGCTG CTGCATTTCG CGACCGACCT GCGCAGCGCC
ACCGGGCGCG GCACGCCGTT CGAGAGCGTG GCAGCCACCG GCACCATCGC CAGCGGCATC
GCCCACACTG AAGATTTTGC CGTCAAGGGC CCGCAATTCC AGGTGGCCAT GCAGGGCTCG
GCCAACATCC TGGATGAAAC GCAGGACCTG CGCGTCAAGG TCACGCCCAA GGTGGACGCC
ACGTCGGCCT CGCTGGCGGC GGCGTTCATC AATCCGGCCA TCGGGCTGGG CACGCTGGCC
GCGCAGTTGG TCCTGGGCGA CCAGTTGTCG AAGGCATTCG TCACGCAATA CCACGTGACC
GGTAGCTGGG CCGATCCGAA GATCGAGAAA GTCGCATCCA ACGGTAATTC CGGCAGCCAA
TCGCAAACCT CGGCAAAATA G
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| Protein sequence | MPRPSQPPES PKSDGGHAST LSTRGGGRPT AWAWLVRLAR RVGAGIGAAF RAPIWRKLWR
VLWKTAAALA VLAVVGMLAV RFILWPRASV AREWMQREAS SALHATVDIG SLETYWEGWH
PAFRAQRIDA HDTAGRRTFA IQDVQARLSW RSLLRMQITF AALHASQADV LVRRDTQGAL
LVAGMPLGPD TGGDSNFLDQ LLSQGDIDFQ QGAVRWLDEQ QKLPEVALGN VRVQLHSGPT
RHRLEASGTS ATLFNGPIKL HADFRHDLLA RPGDWRHWHG QASWQVDTLQ LAAVQRYVPV
LAAAKSGTLT SDGSVEFAGG VFTRSQARLT GQQLDLQVRK DLDPLQLRSL QALATHQRNA
RGEHALRLDT LLWQPLNPPA QPPSVPELAG PGIQAPTNPA GTPRGVRNVT VGWALDARDA
LRSLQVKATT LDLADLRNIA TALPLPAGVL EPLRTKQPSG RIDDLDINWQ RDVSRWRPNT
PAPVHFTGRA TMRQVSFGPG ALPAVPPGQH PEPAVPGVEN LSGNAVFSDD KGTLRIESND
TALLLPGTFA DARVPLDRLQ GTFNWTYRKQ ELVVASDNLA FSNDDLSARI TGSYRHAPDT
SHLGTIDLKG TLDRANVPRV PRYLPLSIGQ HLRDYLGGAL QAGTANNVGF ALAGDLHDFP
FRPPHKGVFR VEVPIQDVTY QSAPAEAGHN LPGRVPTHPG DWPAFTNIDG TVIFDRASLA
FKVARAKVMG VNLQDVNGRL PDMGDHNPLL TIEGRGDGAT QNFLQYVEAS PIGQWIGHFT
KDARAQGNAT LALKLDLPLH EMHSTRAQGS VTFLRNDVTL VPQAPPLTDV NGALTFTQKG
IGFDNLRARF AGGEIRPTGG TAPDGTIRIQ VAGTASAQGL RETTPENSPV AAVARSLEGS
APYSATISVK QHRPLIQVQS DLTPMTVRLP APLNKAAGQP LPVRFEMQPL ASNNAIDEIV
LQVGNIVSAR YEQRSTGNGV EVLRGGIGVR QPVPQPQEGV QANLALDQLD IDAWRHVFAA
PAADKSAGQI AAEHATNAPN ASDSHSAYLP SHLSARAQTL RILGRDFNAV RIDATRDGPN
WQSTIDSREI AGSARWHAES AAVPFGELTM RLSRMSIPDA KEETALTESL ASSSQEIPSL
DLVADKFDLR GKALGKLEIK ARSQITDGAP VWTLETLKIE QPAATLTAHG TWRIPRRLRG
GGDDPERRTL LDFNLDLRDT GELLQKMGFA KVIDGAKGKL EGRVVWRGSP MSIDYPTLNG
RMALNLERGQ FLPVDPGLAK LAGVLSLQGL LHFATDLRSA TGRGTPFESV AATGTIASGI
AHTEDFAVKG PQFQVAMQGS ANILDETQDL RVKVTPKVDA TSASLAAAFI NPAIGLGTLA
AQLVLGDQLS KAFVTQYHVT GSWADPKIEK VASNGNSGSQ SQTSAK
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