Gene Rpic_2703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2703 
SymbolargD 
ID6287411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2817114 
End bp2818301 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content64% 
IMG OID642626275 
Productacetylornithine transaminase protein 
Protein accessionYP_001900260 
Protein GI187929773 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4992] Ornithine/acetylornithine aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTTG CTGACTACCC CGTCCAGTCC CTGATGTACA TCACCAACCG GCCCGAGATC 
GTCTTCACCG AAGGCAAGGG CTCGTGGCTG ACGGACCACA ACGGCAAGCG CTACCTGGAC
TTCGTGCAAG GCTGGGCTGT CAACTGCCTC GGCCACTCCA ACGACGGCAT GATCGAAGCG
CTGAACGCGC AGGCCCGGAA GCTGATCAAC CCGAGCCCGG CGTTCTACAA CGAGCCGATG
GCCAAGCTGG CCGGCCTGCT GACGGCGCAC AGCTGTTTCG ACAAGGTGTT CTTCGCCAAC
AGCGGCGCCG AAGCCAACGA AGGCGCCATC AAGCTCGCCC GCAAGTGGGG CAAGAAGCAT
AAGAACGGCG CCTTCCAGAT CATCACGTTC GACCACAGCT TCCACGGCCG CACGCTCGCC
ACCATGAGCG CGTCGGGCAA GGCCGGCTGG GACACCATCT TCGCGCCGCA GGTGCCGGGC
TTCCCGAAAG CCATCCTGAA CGACATTGCC TCGGTGGAAG CGCTCATCAC CGACGAGACT
GTCGGCGTGA TGCTTGAGCC GGTGCAAGGC GAAGGCGGCG TGCTGCCGGC CACGCCGGAA
TTCATGCAGC AACTGCGTGC GCTGACCAAG AAGCACAAGA TCCTGTTGAT CGTTGATGAA
GTGCAGGCCG GTTGCGGCCG CTGCGGGACC CTCTTCGCCT ATCAGCTCTC GAACATCGAG
CCGGACATCA TGACGCTGGG CAAGGGCATC GGCGGTGGTG TACCGCTGTC GGCCCTGCTG
TGCACGGATG AAGTCGCCAG CTTTGAAGCC GGCGACCAGG GCGGGACCTA CAACGGCAAC
CCGCTCATGA CGGCCGTCGG CTGCTCGGTG ATCGAGCAAC TCCTGGCCCC GGGCTTCCTG
ACTGGCGTGG AAGAACGCGG CGCCTATCTG CGCACGCAAC TGCTCAAGCT GAGCGAAGAG
TTCGGCCTGG CCGGCGAGCG CGGTAACGGC CTGCTGCGCG CGCTGCTGCT CGGCAAGGAC
ATCGGCGGCC AACTGGTCGA AGCTGCACGC GAGATGAACC CGACGGGCTT GCTGCTGAAC
GCCCCGCGTC CGAACATCCT CCGATTCATG CCCGCGCTGA ACGTGACGAC CGAAGAAATC
GACACGATGA TCGGCATGCT GCGCACGCTG CTGAAGGCGC ACGCCTAA
 
Protein sequence
MAFADYPVQS LMYITNRPEI VFTEGKGSWL TDHNGKRYLD FVQGWAVNCL GHSNDGMIEA 
LNAQARKLIN PSPAFYNEPM AKLAGLLTAH SCFDKVFFAN SGAEANEGAI KLARKWGKKH
KNGAFQIITF DHSFHGRTLA TMSASGKAGW DTIFAPQVPG FPKAILNDIA SVEALITDET
VGVMLEPVQG EGGVLPATPE FMQQLRALTK KHKILLIVDE VQAGCGRCGT LFAYQLSNIE
PDIMTLGKGI GGGVPLSALL CTDEVASFEA GDQGGTYNGN PLMTAVGCSV IEQLLAPGFL
TGVEERGAYL RTQLLKLSEE FGLAGERGNG LLRALLLGKD IGGQLVEAAR EMNPTGLLLN
APRPNILRFM PALNVTTEEI DTMIGMLRTL LKAHA