Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2286 |
Symbol | |
ID | 6288172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2406175 |
End bp | 2408118 |
Gene Length | 1944 bp |
Protein Length | 647 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642625861 |
Product | hypothetical protein |
Protein accession | YP_001899852 |
Protein GI | 187929365 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.959079 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACAAC TTCTGCCGAA CGGTAAGCAG ACATTCTTCT ATCAGAATGG CTCACCACTT GCGAACGGAT CTGTGGCGTT CTATCTGCCC AACACGACGA CGCCCGCGAC GACATGGGCA GATCCTGGGA GTCAGACGCC GAATCCCAAT CCGGTCCCGT TGGACGCGAA TGGTCAAGCC ATCATCTACG GAAACGGCGC CTACCGACAA ATCGTCAAAG ACGCCAATGG CGTCACGATC TGGGACCAGC AGACAGCAGC GGCGGCTGGC TATGCGGATC TGAGCGCCAA TGGCGCGACG AATCCCGGTG CTTCTTTGGT TGGCTTTGAT GGGGGAACCC TCGCAACCAG CCTGTTGAGC AAGATAAACC GCATAGTTGA CTCTATCTCG GCGCTGCGGG GTCTGAGCAA GGCAACCTAC AACAGGGCCT TTGTCACTGG CTATTACGCC GCTCACGATG GCGGCGGCGG TGCATACCAG TACGACCCGA ACGACACGAC GAGCACGGAC AACGGCGGCA CGATCATCGT CGCGAGCGAT GGGGGCCGAT GGAAGCTCCA ATATACCGGG CCGATTTCGC TGAAGCAGTT CGGCTGCAAG ATTGACGGTG CGACGGATGA CACGACGGCA ATCCAGGCGG CCGTTACTGC ACTGGCTAGC GGTGATCTTT ACCACCCTGG CGGCACGTGT GTCATCTCCA GCATCAACAT CACCACCGCG CTCAAGCTCA TCGGCGCCGG TCCCAAGTCG TCCATCATCA AGACCAATAG CGCGACGCTT GATGTCCTGA ATTGCACGGG CGTAGGCATC GTCATCGAAA AGATTGGCTT CGATACTTCA GTGACGCGCA CGGCCGGGGC CTTCGTGCGG TTCCAGTCGG CATGCAGTCA AGTGACATTG CGCGACTTCG CAATGTCGAA TTACTTCGTC GGGATTCGGG ATACTTCGGC CGCAGCGAGC CGCATTCAAG ACGGCTATAT GTTCGGGCCA GCGACCGCGC CAGGCGCCGG GTCGGCCGGC ATTCTGGTGG ATGGTGGCAA TGACACCTAC ATCAACCAGG TCACGATGGA TGCTCCGGCG GCTCAGCAGC CGGCGGCCGG CATTCAAGTA ACGCAGACGG GCGCGCTGAA CATCACCGAC TGCGACATCA TCCACCACAC CGCCGATCTG CTCATCAACC CAGGCAACGG ACAAAGCGTC GCGTCAGTGT ACGCGGTCAA TAGCTACTTT GATACGGCAG TGCGCGGCGT GTCGATCGCG CCGACCGGAA ACGGCGTCGT CATCCGTCTG CACTTCATAG GATGCTGGAC ATCGAGCCAT ACCGACTCCG GTTTCTTCGT GCAATCGTCC TCGACAGGCG CGCTAGATGG CATCGAGATC ACCAATCACC ATGCCATTTT ATGCGCGGCC AATGGCATGT TGTTCAATAA CGGCACGACC AACCCGAGCG GCATCACCAT CCTCGGTGGC GATTTTGCCG GCAACGGTCA GAATGGCATC GCATTTGGCG CGGGAGTATT GAATTTCAGC GTTATCGGCG CGCACAGCGG TGCATACGCC GGACAGGCGG GCAATGGTCA ATGGGGCATC CTGATTGCGG CGGGCGCCTC GAATCAGTAC GTCATCCAAG GCTGTCATCT ACTCGGAAAC ACGAGCGGCA CCATCTCGGA CGGCGGTACG GGAAGCACGA AGTTCATCGA GAACAACATC GGTGTGACTG GCGTTCAGAC GGTTCCGACA GTGGGCGCTT CCCCCTGGAC GTACACGAAT TCTACTGCGC GCCACCAGAC GGCCTATATC AACGGGGGCA CCGTCTCAAT CGTCGCGGTG AATGGCTCAA ACATCTTCAC GCAGACGAAC TGCACCGCGC GCATCCCTCC TGGCCAGAGC ATGACCATCA CCTATTCCAG CGCCCCCGGC GTTGGCATCA CCACTGACGC ATAA
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Protein sequence | MPQLLPNGKQ TFFYQNGSPL ANGSVAFYLP NTTTPATTWA DPGSQTPNPN PVPLDANGQA IIYGNGAYRQ IVKDANGVTI WDQQTAAAAG YADLSANGAT NPGASLVGFD GGTLATSLLS KINRIVDSIS ALRGLSKATY NRAFVTGYYA AHDGGGGAYQ YDPNDTTSTD NGGTIIVASD GGRWKLQYTG PISLKQFGCK IDGATDDTTA IQAAVTALAS GDLYHPGGTC VISSINITTA LKLIGAGPKS SIIKTNSATL DVLNCTGVGI VIEKIGFDTS VTRTAGAFVR FQSACSQVTL RDFAMSNYFV GIRDTSAAAS RIQDGYMFGP ATAPGAGSAG ILVDGGNDTY INQVTMDAPA AQQPAAGIQV TQTGALNITD CDIIHHTADL LINPGNGQSV ASVYAVNSYF DTAVRGVSIA PTGNGVVIRL HFIGCWTSSH TDSGFFVQSS STGALDGIEI TNHHAILCAA NGMLFNNGTT NPSGITILGG DFAGNGQNGI AFGAGVLNFS VIGAHSGAYA GQAGNGQWGI LIAAGASNQY VIQGCHLLGN TSGTISDGGT GSTKFIENNI GVTGVQTVPT VGASPWTYTN STARHQTAYI NGGTVSIVAV NGSNIFTQTN CTARIPPGQS MTITYSSAPG VGITTDA
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