Gene Rpic_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2018 
Symbol 
ID6287588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2122542 
End bp2124080 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content63% 
IMG OID642625587 
ProductPpx/GppA phosphatase 
Protein accessionYP_001899584 
Protein GI187929097 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCCA CCCCCCGTCT GCTGGCTGCT GTCGACATGG GCTCCAACAG CTTCCGGCTG 
ATGATCGGCC GCGTCGACGA AACCCTTGGT GCCAACGGTG CCAGCAGTAC CCAGATCTTC
CAGGTCGATG CGCTGCGCGA ACCGGTGCGT TTGGCTGCCG GGCTTACGCA AGATAAATAC
CTGGATCAGC CCGCGCGCCG GCGCGGCGTC GACGCCTTGC GCCGCTTTGG CGATCGCTTG
CGTGATTTTT CCCCCGAGCA TATCCGGGCC GTGGCCACTA ACACCTTGCG CGTGGCCAAG
AACGCGCAGG AATTCCTGAT CGAGGCGGAA GCCGCGCTAG GGTTTCCCAT CGAGGTGATT
GCGGGCCGCG AAGAGGCACG CCTGATCTAT CTCGGTGCAT CGCATGACGC ACCGGCGTGC
CAGGGCAACC GGCTCGTCGT CGACATCGGC GGCGGCTCCA CCGAGTTCAT TATCGGCAAC
GGCTACAAGC CCAAGCTGAT GGAGTCGCTG TACATCGGTT GCGTTTCGCA CAGCCGGCAT
TTCTTTCCGA ACGGCAACGT TGATGAATAC GCGATGAAGC AGGCCGAGCT GGCCGCGCGT
CGCGAGATCC AGGTGCTCGT GCAGCAGTAC CGCACGGCTG GCTGGACGCA GGCCGTCGGG
TCATCGGGGA CGGCGCGTGC GCTGGCTGAG CTGATCGAGC TGAACGGCTT CAATGACAAG
AGCAACGAAC ACGGTATTAC GCGTGAAGGG CTGGAGCGCC TGAAGCGCGC GCTCGTCAAG
TCAGAGAACA CCAACCGCCT GAAGCTCAAC GGCCTGAAGG CGGACCGGAT TCCGGTGCTG
CCGGGCGGCC TGTCGATCAT GCTGGGCGTG TTTGCGGAAC TCGATGTCGA CCGTATGGAC
GTGACCGATG GCGCCTTGCG CCTGGGCGTG CTGTATGACC TGCTCGGCCG TACGCATCAT
GAAGACATGC GCACGGTGAC GATCGAACAG TTCATGCGCC GTTACAACGT CGACCGTGCG
CAGGCAAGCC GGGTACGCGA TGCGGCGACG GCGCTGTTGT CGCAGTTTCC CGATCCGCCC
GATGAGCGCC GCGAAGACAA TCTCGCGCTG CTCGGTTGGG CGGCAAACCT GCACGAGATC
GGCATGAGCA TCTCGCACAG CGGGTACCAC AAGCACTCGG CGTACATCGC CAGCCATGCC
GATATGCCGG GTTTTTCCAG GACAGACCAA GCGCGCCTGG CAACGCTGCT GCTGGGCCAC
GCCGGCAAGC TGGGCAAGCT TTCGGGCGGC GGCAAGTTCC TGGATTGGCG GATGCTGTTC
AGCCTGCGTC TGGCGTTTGT GCTGTGCCGC AGGCGCGGAG CGATCCAGTT GCCGGGCTTG
CGCGTGCGCC ATAGCGAGGG CGAACTGAAC GAAGGCGGTT TCGAAGTCGA GCTGCCCAAG
AACTGGATCG AGCAGAATCC GCTGGTGGAA TACAGCCTGA CGAAGGAAGC CGATGAGTGG
CAGCGCATCG GCCGCCGCTA CAAGGTGGTG TACGTGTAA
 
Protein sequence
MSPTPRLLAA VDMGSNSFRL MIGRVDETLG ANGASSTQIF QVDALREPVR LAAGLTQDKY 
LDQPARRRGV DALRRFGDRL RDFSPEHIRA VATNTLRVAK NAQEFLIEAE AALGFPIEVI
AGREEARLIY LGASHDAPAC QGNRLVVDIG GGSTEFIIGN GYKPKLMESL YIGCVSHSRH
FFPNGNVDEY AMKQAELAAR REIQVLVQQY RTAGWTQAVG SSGTARALAE LIELNGFNDK
SNEHGITREG LERLKRALVK SENTNRLKLN GLKADRIPVL PGGLSIMLGV FAELDVDRMD
VTDGALRLGV LYDLLGRTHH EDMRTVTIEQ FMRRYNVDRA QASRVRDAAT ALLSQFPDPP
DERREDNLAL LGWAANLHEI GMSISHSGYH KHSAYIASHA DMPGFSRTDQ ARLATLLLGH
AGKLGKLSGG GKFLDWRMLF SLRLAFVLCR RRGAIQLPGL RVRHSEGELN EGGFEVELPK
NWIEQNPLVE YSLTKEADEW QRIGRRYKVV YV