Gene Rpic_1545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1545 
Symbol 
ID6286529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1636613 
End bp1637794 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content60% 
IMG OID642625110 
Producthypothetical protein 
Protein accessionYP_001899116 
Protein GI187928629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGTT CGACTGCTCT TTCTGCCAAA GACTCGCTCA TCCTTCCCGA CCGGATTACC 
GACCGGATCC GTTCCATCAA CTACCAGCTT GCGGATTTCA TGGGCACCTG CATGCTTCGG
CACCGGGAAG TGGCGCCAGT ATTTGGAGTG CGGCCGGAAG AGCTGGCCAT GCTCGCGCAG
AACGCTGCAG GGCAGCGGCA GTTGATGGGA ACACCGTTCC TGGTCGTGAC ACCGATGTTC
AAGAACGTCG AAGATTGGCG CAGCCTCATC AAGAAGACGA CACCAACCCT GGCCATTGAC
AAGGTGAAGG CGGAATTCGG CAACCTTGAT CCCAGCCTGA AGATGAGCTT GTTCCACCAG
AACAAGGATT ACGTCTGGAT GGTAGTCGAC CTACTCCACT CCACGCCCGT TGCCGCTCAA
CTGCTGGGCA TGCCGCAAGA CCTGGCTGAC TATCTCGTGA CCGTGTCTCA GCACGAGCTG
GAGCTTGCCA TCTTCGGCGC CAACTTCCCG ATGTTCCGTT GGCGTTTTGA GAATCCGATG
TTCTGGCTTG AGTATTCGGC CAACCTCATC TCGGAAGAGA CGATCTGCCA CCACGTGATG
AACGCCGGCG ACTCACGTGC CCCGCGGCCC CTGCAACGTG AACGCTGGGG AAATTTCCGC
GTCGGCCGCG CGCAGATGGA ACGCTATACC GAGGCGCTCA TTGGCCTGCG TTGCCGCGCA
TCCAGCGTGG CCTCGATGTT CCCTGGCACC GCGGCTACGG CGCGCGCTCT CTATCGACAA
ATCCACGGCG AATCGTCTCC CTGCGGCCTG ATGCCCTCCT CGTCATCCTG GTACGTGGAG
TCGGTGTCGA GCCGCATTCA GTCGACGACG CTGATTTGGC TGTACTGGAG CGCCCTTGCC
GCACGTGCGA ACGAGCCAGA GGCGTTCATC ACCGCACTCG ACACCGTCGG GCGTCTGTTC
GGCGATGCCG CGCGGCTGAC CCCGGACCGG GCGTTCCATT TGGCCCGATC AGTGTCCACC
GGCAGCGATT TGTCCATGTC CAGTTGCCGC ACCTGTTCCA CGCACTATCT GACGTGCAAT
ACCACGCCAA AAATCGAACT GGCGGCGTCC TTCTATTGCC CGTCATGCAC AGGTGCGTTG
ACGGCGCCAC GCAAGGGCAA ACCGCGCAAA CAACTCGCAT AG
 
Protein sequence
MTRSTALSAK DSLILPDRIT DRIRSINYQL ADFMGTCMLR HREVAPVFGV RPEELAMLAQ 
NAAGQRQLMG TPFLVVTPMF KNVEDWRSLI KKTTPTLAID KVKAEFGNLD PSLKMSLFHQ
NKDYVWMVVD LLHSTPVAAQ LLGMPQDLAD YLVTVSQHEL ELAIFGANFP MFRWRFENPM
FWLEYSANLI SEETICHHVM NAGDSRAPRP LQRERWGNFR VGRAQMERYT EALIGLRCRA
SSVASMFPGT AATARALYRQ IHGESSPCGL MPSSSSWYVE SVSSRIQSTT LIWLYWSALA
ARANEPEAFI TALDTVGRLF GDAARLTPDR AFHLARSVST GSDLSMSSCR TCSTHYLTCN
TTPKIELAAS FYCPSCTGAL TAPRKGKPRK QLA