Gene Rpic_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1510 
Symbol 
ID6286550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1602990 
End bp1604297 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content56% 
IMG OID642625075 
Producthypothetical protein 
Protein accessionYP_001899081 
Protein GI187928594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.446382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCG TACCCGAAGC AAAGAAGGGT TCCCAGATCG CCCTGTTTCA ACAACAGGAG 
GCTCCTGAGC CGTTCAAGAA GGCGGTTCAA GCGATCCACG TTTCACCGGT AGGTAGTGCG
CTGTCGCTCC AGCAGCGCCG CATCTTCAAT GCACTGATCA AGAACGCCAT CGAGCAACGC
CTGGCAGGCC GAGAAACAAA CAACACGTTT CAGGTCTCTA TCCCTCAGAT GATGGCAGCG
CTCGACCTCA CCACGAAGGA CAACGCATAC ATCAAAGAGA CCGCAAAATC GTTGATGCGC
ACTGTCGTGG ATTGGGATCA GCTCAATAGC GACGGCACGT CGACATGGAC GGGTTCAACA
CTCATTGCCG GCGCCAAGAT TGTGGGCTCC GTCTTGTCGT ATTCGTTCGC TCCGCAGATC
AGTGAGGAGC TACTGGATCC CCAACGGTAC GCAATGATCG ACATGCGGAT CGCCAAGCTG
TTCCGGCGGT CCTATTCGCT TGCGTTGTGG GAGAACACTG TACGGTTCGA ACGGATAGGC
CTGACCGCAC GTATCCCACT GGCCACCTTT CGCAATCTCA TACTCGGACG CGAAGAGAGC
GAGACCAAAT ACAAGGAATA CAAGATCTTC AAGCGAGCGG TGTTGACGCC GAGTATTGCC
GAAATCAATG ATGTATCAGA CCATGAGATC GAGTTGATCG AGCACAAGGT CGGCCGAACC
GTCGGTGAGA TTCAATTCAA GATCAGTCGC AAAGTGAGCG CACTGGAGGA GGAGCCTCAC
CAAGACCTAG TCAACACAGT GGTCAAGTTC GGTGTCCCGC ATTCCGAGGC CAAGCGCCTC
GTTCGCACGT TCGGAGCCGA ACGCATCCTG GAGGCAATCA GCTACACGCG CGCTCGACAA
GCGAAGAAGG GTGTTCCGCC GTTGGATAAC ATCCCGGCGT ACTTTCGCAA GTCGCTTACG
GAGGATTGGG GCAAGGGCGC GGGCAAGGCT GAGTCTGCCG GAGCTGGTCA ACAGCAGCAG
AAGCCGTTGG CACGAAGCCC AAAGAATGAA GAGGATGCGC GGGCGCAATA CCTCGCAGCT
CGCATTCCGC ATGCGCAGGG CTACTTTGGG GAACTATCCG CTGACGATCA GTCGGCGATG
CTCTCGCGTT ACAACGATCA GTGTTCTGTG AAGGAGTTGA AGGTCGTCGC AGGCAAGAAG
CCCTCCAAGG CAGCGGAATC GAATTTTTTC GAATGGGTGG CACACGAAAC TTGGGGCGAA
CCCAATGCCG GCGAAATTCT GAACTTCGTG CTGTCGGGAA AAGTCTAG
 
Protein sequence
MARVPEAKKG SQIALFQQQE APEPFKKAVQ AIHVSPVGSA LSLQQRRIFN ALIKNAIEQR 
LAGRETNNTF QVSIPQMMAA LDLTTKDNAY IKETAKSLMR TVVDWDQLNS DGTSTWTGST
LIAGAKIVGS VLSYSFAPQI SEELLDPQRY AMIDMRIAKL FRRSYSLALW ENTVRFERIG
LTARIPLATF RNLILGREES ETKYKEYKIF KRAVLTPSIA EINDVSDHEI ELIEHKVGRT
VGEIQFKISR KVSALEEEPH QDLVNTVVKF GVPHSEAKRL VRTFGAERIL EAISYTRARQ
AKKGVPPLDN IPAYFRKSLT EDWGKGAGKA ESAGAGQQQQ KPLARSPKNE EDARAQYLAA
RIPHAQGYFG ELSADDQSAM LSRYNDQCSV KELKVVAGKK PSKAAESNFF EWVAHETWGE
PNAGEILNFV LSGKV