Gene Rpic_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1279 
Symboltsf 
ID6289425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1374601 
End bp1375479 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content61% 
IMG OID642624849 
Productelongation factor Ts 
Protein accessionYP_001898855 
Protein GI187928368 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.347104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.174908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCAA TTACCGCAAG CATGGTTGCA GAGCTGCGCG CAAAGACCGA CGCGCCGATG 
ATGGAATGCA AGAAGGCCCT GACCGAAGCC GAAGGCAACC TGGAAAAGGC TGAAGAGATC
CTGCGCGTGA AGCTGGGCAA CAAGGCGGGC AAGGCTTCCA GCCGCGTCAC CGCTGAAGGC
GTGGTCGCAG CGTTCGTCGA GGGCACCACG GGCGCCCTGG TCGAAGTGAA CTGCGAAACC
GACTTCGTCT CGAAGAACGA CGATTTCCTG GCTTTCACCA ACGAGGTTGC CAAGCTGATC
GCTCAGAAGA ACCCGGCTGA CGTGGCTGCC CTGTCGGCCC TGTCGATCGG CGATGAAACG
GTCGAAGCCG TGCGCACCCG CCTGATCGGC AAGATCGGCG AGAACATGAC GATCCGCCGC
TTCCAGCGTT TCGAAGGCAC GCAGCTGACT TCGTATCTGC ACGGCACGCG CATTGGCGTG
ATGGTGGCAT TCGAAGGCAA CGAAGTGGCG GCTAAGGACG CTGCAATGCA GGCTGCCGCC
ATGAAGCCGG TGTCGCTGTC GGCTGACGAC GTGCCGGCCG AACTGGTCGC CAAGGAGCGC
AGCGTTGCTG AGCAGAAGGC TGCTGAATCG GGCAAGCCGG CTGAAATCGT TGCCAAGATG
GTGGAAGGCA GCGTGCAGAA GTACCTGAAG GAAGTGTCGC TGCTGAACCA GCCGTTCGTG
AAGAACGACA AGCAGACCGT TGAGCAGATG CTCAAGGCCG CCAACACGAC CGTGAAGGCT
TTCACGCTGT ACGTGGTGGG CGAGGGCATC GAGAAGAAGC AAGACGACTT CGCTGCTGAA
GTGGCTGCCC AGGTGGCCGC TGCCAAGCAA CAGGCGTAA
 
Protein sequence
MAAITASMVA ELRAKTDAPM MECKKALTEA EGNLEKAEEI LRVKLGNKAG KASSRVTAEG 
VVAAFVEGTT GALVEVNCET DFVSKNDDFL AFTNEVAKLI AQKNPADVAA LSALSIGDET
VEAVRTRLIG KIGENMTIRR FQRFEGTQLT SYLHGTRIGV MVAFEGNEVA AKDAAMQAAA
MKPVSLSADD VPAELVAKER SVAEQKAAES GKPAEIVAKM VEGSVQKYLK EVSLLNQPFV
KNDKQTVEQM LKAANTTVKA FTLYVVGEGI EKKQDDFAAE VAAQVAAAKQ QA