| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1238 |
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| Symbol | |
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| ID | 6288529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1326084 |
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| End bp | 1327541 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624808 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_001898814 |
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| Protein GI | 187928327 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.22372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAT TCACGCCCAC CCTGGAGGCG CTGCGCGCGC GTTACGGCGA GCGCTTCAAA
TGGCTCGTTC TCTTCACGCT GATGGTGGGT GCGGTGTCGT CCGTCATCTC CGCCACGATC
GTGAACGTGG CGATTCCCGA CCTAAGCCGG CATTTCGTGC TCGGGCAGGA ACGCGCGCAG
TGGGTATCGG CCAGCTTCAT GGTGGCGATG ACGTTGTCGA TGCTGCTGAC ACCGTGGCTG
CTGCTGCGTT TCGGGCTGCG TCGCACGTTT ATCGGCGCGT TGCTGCTGCT GGGCGTCGGC
GGGCTGGCGG GTGGCCTGTC GCCCAATTAC GAAGTAATGA TCGCCATGCG CGTCGTGGAA
GGGATTGCGG CCGGCATCAT GCAGCCGCTG CCCAACATCC TGATCCTGCG CGTGTTTCCC
GAGCGCGAGC AGGGCAAGGC GTTCGGCCTG TTCGGCTTTG GTGTTGTGCT CGCGCCGGCC
GTGGGCCCGA GCGTGGGCGG TTTCCTGGTG GAATTGTTCG GCTGGCGCTC GATCTTCTTC
GTGGTGATGC CGTTCACGCT GATCGGCTGG GCGATGGCGC GGCGCTTCAT GGCCATCAAC
TCGTCGATGG CAGGCGAGCC CAAGCCGCTC GATTGGCGTG GCCTGCTGCT AATCGGCGGT
GCGACCGTCA CGCTGCTCAA CGGACTGGTC GCGCTGCATG GCGATGCTGC GCACGGCATA
GTGCTGATGC TCGTGTCGGG CGTGTGCCTG GCGGGCTTCG TGTTCTGGCA GCGGCGGGTG
GAGTCGCCGT TGCTGAACCT GCGGCTGTTC AGCTACCGGC AGTTTGCGAT GGGGGCAGTC
GTGGCTTTCA TCTACGGGGC AGGGCTGTAC GGTTCGACGT ACCTTGTGCC CGTGTATATG
CAGGTGGCGC TGGCCTATGC GCCGTCGCGC GCCGGGCTGG TGCTGCTGCC GGCCGGCCTC
GTGCTGGCCG TGACGATCAT GCTGGCGGGG CGCCTGACCA ATCGCATCGA GCCTTTCCGA
CTGGTGTCGT TCGGGCTGGC GGCCCTGGCG CTGTCGTTTT TCCTGATGGC CACCAACACC
CGGGCAACGA GCTATCTGCT GCTGATCGCC ATCGCCGTCA TCGGGCGGGT TGGGCTCGGT
TTCGTGCTGC CATCGCTGAG CCTTGGCGCC ATGCGCGGTG TTGATTTCAC GTTGATCCCC
CAAGGCTCCA GCGCCGTCAA TTTCCTGCGC CAATTAGGCG GGGCGATCGG TGTGTCGGCT
ACGGGCATTT TTCTGCAATG GCGGCTCGCC ACGCGGGGTA TCGAAACGGT GCACGGTGCG
GCAGTTGACC CCGAAGCTCG CATCCTGGCC TTTGACGAGA CCTTCGTCTT TCTCGGGACG
CTGTGCGCAC TGGCCGTGCT GGCTGCATGG CGCATGCGCC GCCGCGAGCT GCCGTCCGCC
ATTCCTGCAG CGCAATAA
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| Protein sequence | MTTFTPTLEA LRARYGERFK WLVLFTLMVG AVSSVISATI VNVAIPDLSR HFVLGQERAQ
WVSASFMVAM TLSMLLTPWL LLRFGLRRTF IGALLLLGVG GLAGGLSPNY EVMIAMRVVE
GIAAGIMQPL PNILILRVFP EREQGKAFGL FGFGVVLAPA VGPSVGGFLV ELFGWRSIFF
VVMPFTLIGW AMARRFMAIN SSMAGEPKPL DWRGLLLIGG ATVTLLNGLV ALHGDAAHGI
VLMLVSGVCL AGFVFWQRRV ESPLLNLRLF SYRQFAMGAV VAFIYGAGLY GSTYLVPVYM
QVALAYAPSR AGLVLLPAGL VLAVTIMLAG RLTNRIEPFR LVSFGLAALA LSFFLMATNT
RATSYLLLIA IAVIGRVGLG FVLPSLSLGA MRGVDFTLIP QGSSAVNFLR QLGGAIGVSA
TGIFLQWRLA TRGIETVHGA AVDPEARILA FDETFVFLGT LCALAVLAAW RMRRRELPSA
IPAAQ
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