| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1167 |
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| Symbol | |
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| ID | 6286929 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1256943 |
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| End bp | 1260418 |
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| Gene Length | 3476 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 63% |
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| IMG OID | 642923669 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.366883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.484716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTC AGGACAGCAG GCTGGGAGTT GACCCCGGCA GCGATGAATC AGGTGGCAGG
GATATCAATG AACTTCTCGG CGCGGCGCGA CGGGAAATCA AGGTGCACTG TTACCGCATG
TTGGGGTCAC TGCATGAGGC TGATGACGCC GTTCAGGATG CGTTCGTTCG TGCATGGCGA
AGCTACGGCA CGTTCGATGG CCGCGGTTCG TTTCGAGCGT GGCTCTATCG GATCGCGACA
AACGTCTGTC TTGATGCGCT CAGCAAACGG AAAAATCTAG CGCGCCGCCT CCCAGATCAG
CTCGACGGCC CCACCACCGC CATGCCGGAC GGACAACCTG CGCCTGATGT TGCTTGGCTG
TAAGCACCCG GTGAACCCGT CTTGAAGGGG ACCCGCGTAG CAAGGAGCAT CGTGTCCATC
TAGTTCTAGG TGGACACGTG GACACTATCG AAGAGAGCGC GCCAATACGG CGCCGACGTC
GGCATAGCGC CGAGTTCAAG GCCAAGGCAG TGCAGGAGTG CATGCAGCCG GGTGTTTCGA
TCGCGGCGAT AGCCCTGCAC CATCGCCTCA ATGCGAATCT GCTGCGGCGC TGGGTCGCCG
AGCAGGAAGC AAAGAATGGC GCGCCTGAGG ACCGCGAGTT GATGAGGGTG CCGCAAGGCG
AGTTCATCCC GTTGCGGATC GGCGAGCCGA CCACTGCCGT GCCGGACATC CAGATCGAAG
TCCGCCGTGG CGCGACGACG ATCAGTCTTC GCTGGCCGGG ATCGGCCGCA GCGCAGTGCG
CCCAGTGGCT GCAAGGGTGG TTGCGTTGAT TCGGGTGGAC GCGATCTGGT TGGCCGTGGA
GCCGCTGGAC ATGCGCGCCG GTACCGAAAC GATCCTCGCG CGGGTCGTCA AGGTGTTCGG
CGCGGCACGC CCCCACCACG CCTACCTGTT TGCCAATAAG AGTTCGACGC GCATGAAGGT
GCTGGTCTAC GACGGCTTCG GCATCTGGCT GGCCGCGCGG CGCCTCAACA AGGGGCGCTT
CATCTGGACG AACGGCGACC AGGCGATCGC CACGGCGCTC AATCCCGAGC AATTGCGTGC
GCTGGTGACG GGGCTGCCTT GGCAGACGCT CACCCACGAC CACGCGATCA CGGTCGTGTA
ATACCCCCAA AGCCGTAAAC TGGCTTCCTT CCAGAGGACT TGGGGTTCTG GCAGACTCGC
CGCATGAACC TACCCACCAA CCTCGATGCC CTGAGCCCGG ACGAACTGCG CACACTGGCT
GCGCAGTTGA TGGCCCAGGT CGGCGAGAAG GACCGGGAGT TGCGGTACCG GCAAGCCAAG
ATCGACCAGC TCACACACGA GCTGGCCATC CACAAGCGCT GGAAGTTCGG CAAGCGCAGC
GAGCAACTGA CATCTGAACA GGCGAGTCTG CTGGACGAAG CCATTGACGC AGACCTCGAG
GCGATTGAGA CCGAACTGGA AGCGCTCCTG CCGTCGTCCA AATCTGAAGC CAAGAGCAAG
CCCAAGCGCC AGGCATTGCC GCCGCAGTTG CCGCGCACCG ACATCCACCA CGAGCCGGAC
GCAGAGACCT GCACCTGTGG GTGTGCGCTC AAGCGCATTG GCGAAGACAT CAGCGAGAAG
CTGGACTACA CGCCGGGCAC GTTCACCGTG GAGCGTCACA TCCGCGGCAA ATGGGTGTGC
GATCAGTGTG AGACGCTGGT GCAGACGCCG GTGCCACCCC ACGTCATCGA CAAAGGCATC
CCGACGGCCG GACTGCTGGC ACATACGCTG GTGTCCAAGT TCGGCGACCA CCTTCCCCTG
TATCGGCAGG AGCGCATCTA TGCGCGCGCC GGTCTGGCCA TCCCGCAATC GACACTGGGC
GCGTGGGTGG GCATCTGTGG CGTGCGTCTG CAACCGCTGG TGGACGCCCT GCAAGAAGAG
GTTCTGAGCC ACGGTGTTCT GCACGCCGAC GAAACGCCAG TGCAGATGCT CGCGCCCGGC
AATGGCAAGA CGCACCGCGC CTACCTGTGG GCCTATGCGC CGAGCGAGTT CGAGAAGATG
CGCGCGGTGA TTTACCAGTT TGCGCCCAGC CGCAGCGGCG AGCACGCTCG CGCGTTCCTG
GGGCAGTGGC AAGGCAAGCT GGTATGTGAT GACTTCGCCG GCTACAAGGC CAGCTTCGAC
GGTGGCGTCA CTGAGATCGG TTGCATGGCC CATTCGCGGC GCAAGTTCTT TGAACTGCAC
GACAAGCACA AGAGCGAATT GGCGGGCCAG GCACTGCGCT ACATGGTGAG CTTGTACGAG
ATCGAGGCGC AAGTGCGGGA TGCTGAGCCA GACCAGCGCC TGGCAGCGCG GCAACAAAGG
GCTGGCCCGA TTCTAGAGCG GCTGCACGCC TGGCTCGAGG AACAGCGACG CCGCGTCCCA
GACGGCTCGG CGATCGCGCG GGCCATTGAC TACAGCCTCA AGCGGTGGCC GGCTCTCGTG
CGTTACCTCG ACGACCCGAC GGTGCCCATC GACAACAACC ACGTCGAGCG ACAGATCCGG
CCGGTTGCCC TGGGTCGCTC CAATTGGTTG TTTGCAGGCT CACTGCGCGC CGGTCAACGC
GCGGCTGCCG TCATGAGCCT GATCCAATCG GCCAAGCTCA ACGGGCACGA TCCCTACGCC
TATCTGAAAG ACGTCCTCAC GCGACTGCCG ACCCACAAGG CGGCCGACAT CGCCGAACTG
CTCCCGCATC GCTGGACGCC CAGCGCCACC TAGCTGGCAA GACGGGTTCA CCGGGTGCTT
ACGCTTGGCT GGAGCCTTAC CCCCAATCGG AACTGGACGC CGTCACCGAC CCAGGCCCAA
CTCCTGAGGC GCGCATCAGC ATGAGGGAAG CTACGGGCCT GGCGTTCATG GCGGCTATCC
AGCAACTCGC CCCACGACAA CGGGCTGCGC TTTTGCTGTG TGATGTACTG GGGTGGTCGG
TAGCGGAGAC GGCAGGTTTG CTGGGAGGGT CTGTCGCCTC AATCAATAGC GCCTTGCAAC
GCGCCCGCTC GAAGTTGGCC ACTGGTTACA GTTCCGGAGA GATCACCAAC GTAAGCGAGA
CAACGCCAAG CGAAAGGAGT CTTCTTCGCG GCTACGTACA AGCGTGGGAA GAGCGCGATG
CCGATCGGTT GGCCACACTG CTCAAGCACG ACGCGATCTA TACGATGCCA CCGCTCGCGC
AGTGGTATGC CGGACGAGAA TCGATACGAG CCTTCTTCGC ATGGGCGTGG CCGGCATATT
CGGACATACG GATGAAAGAA ATCCGCGCAA ATGGCGAACC TGGATTTGCT GCGTATTTCC
GTTCGCGCTC CTCACCAATG GCGCCGCTGG CAGCGCACTC ACTGCATGTC GTTTCGGTTG
ATGCAGACGG AATCTCACGG ATGACCCTTT TTGTGGGCGG GAATGTGACG CGCCTTTTTG
ATGCGTTCGG CTTGCCCACG ACTATCGCTG ACGCTGCTTC TCCGACTCTT TCTTGA
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| Protein sequence | |
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