| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1151 |
|---|
| Symbol | |
|---|
| ID | 6287180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1233245 |
|---|
| End bp | 1234036 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642624722 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001898729 |
|---|
| Protein GI | 187928242 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0503322 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACATG ACACGCCATT GCTGAGATCA TTCCAGATCC AGTTGCGCGT GGTGGGGGCT
TTGCTGATGC GCGAAATCCT TACCCGCTAC GGGCGGCACA ACATCGGCTT CCTGTGGGTG
TTTTTCGAGC CGATGATGTT CACCTTGGGG GTGACAGCGC TATGGACGTT GAGCAAAGCC
ACCCATGGTT CCAGTTTGCC TATCACCGCG TTTGCTGTAA CTGGATATTC CTCGGTACTG
GTCTGGCGAA ACAGCGCAAG CCGTTGCGCG TTGGCGATTG AGCCTAATCA GAGCTTGCTG
TATCACCGTA ATGTCCGGGT GATCGATCTG TTTTTGTCGC GCGTCATTCT GGAGATTGCC
GGGGCGACCA TTTCCTTTTT GTTTTTGACA ACGCTGTTTG TTACCTTGGG CATGATGGAG
CCGCCGGCTG ATATCACGCA GATCATTGGC GGCTGGATCT ATCTGTCCGT CTTTGGCATT
GGGCTGGGTT TTATCGTCGG TGCGCTAAGC GAGCGGAGTG AAGCTGCTGA ACGGATCTGG
CATACCGTCG CCTATCTGCT ATTTCCGCTT TCGGGGGCGC TGTTCATGGT CGACTGGATG
CCAAGGGCCG TCCAAAAGTA CATTTTGCTG CTTCCGATGG TTCATGGCGT CGAGATGGTA
CGCGGGGGCT ATTTCGGTGC GCTAGTCAAG CCCCATTACG ACATCGGTTA CATGGTCGTT
GCCGATCTGG TGATGCTGTT GGTCGGTCTG TTTTTCGTGA TGGACGCCAG CAAGCGAGTG
GAGCCGGAAT GA
|
|---|
| Protein sequence | MRHDTPLLRS FQIQLRVVGA LLMREILTRY GRHNIGFLWV FFEPMMFTLG VTALWTLSKA
THGSSLPITA FAVTGYSSVL VWRNSASRCA LAIEPNQSLL YHRNVRVIDL FLSRVILEIA
GATISFLFLT TLFVTLGMME PPADITQIIG GWIYLSVFGI GLGFIVGALS ERSEAAERIW
HTVAYLLFPL SGALFMVDWM PRAVQKYILL LPMVHGVEMV RGGYFGALVK PHYDIGYMVV
ADLVMLLVGL FFVMDASKRV EPE
|
|---|
| |