| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1071 |
|---|
| Symbol | |
|---|
| ID | 6289437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 1138498 |
|---|
| End bp | 1139070 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624643 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_001898651 |
|---|
| Protein GI | 187928164 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2236] Predicted phosphoribosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.162671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGC CGATCAACGA CGACTCGCAC CTGTGGGTGT CCTGGGACGA CTACCACGGC
CTGATCGAGC GCTTGGCGCT CGTCGTGCAC GAGTCGGGCT GGAAGTTCGA CAAGATTCTG
TGCCTGGCGC GCGGCGGCTT GCGTGTTGGC GATCAGCTTT CGCGCATCTA CGATCTGCCG
TTGGCCATCC TGGCGACCAG CAGCTATCGC GAAGCCGCCG GCACGCAGCA AGGCGATCTC
GACATCGCGC AATACATCAC TATGACGCGT GGCGAGCTGT CCGGCCGCGT GCTGCTGGTG
GACGATCTGG TGGATTCGGG GGTCACGCTG GAGCGTGTCG GGCGTCACCT GAAAGAGCGT
TATCCGGCCG TGACCGACGT GCGTACCGCT GTGCTGTGGC ACAAGGGGTG CTCGAAGATC
AAGCCCGACT ATGCCGTTCA GTTTCTGCCG ACCAACCCCT GGATCCATCA ACCATTCGAG
GAATACGATA CGCTGCGTCC CCACAATCTG GCGGCGTGGA TCAAGCGCGG CAAGTCGCGC
CCGGCTGGCA ACGGTGAGGC GCCGGGGGTT TGA
|
|---|
| Protein sequence | MNQPINDDSH LWVSWDDYHG LIERLALVVH ESGWKFDKIL CLARGGLRVG DQLSRIYDLP
LAILATSSYR EAAGTQQGDL DIAQYITMTR GELSGRVLLV DDLVDSGVTL ERVGRHLKER
YPAVTDVRTA VLWHKGCSKI KPDYAVQFLP TNPWIHQPFE EYDTLRPHNL AAWIKRGKSR
PAGNGEAPGV
|
|---|
| |