Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0988 |
Symbol | |
ID | 6287197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1043217 |
End bp | 1044413 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642624556 |
Product | NlpBDapX family lipoprotein |
Protein accession | YP_001898568 |
Protein GI | 187928081 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3317] Uncharacterized lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.359862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.208847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTGC ACCAAACCCG TCGCGGGGCT GTGGCGACGT CCGCTCAACT GTTGCTGGCC GCGCTGTCGG TTGCCCTGAT TTCCGGTTGC GATACCGTCA ATGAGGTGAT GCAGCCGGAC CGCATCGATT ACAAATCGCA GGCCAAGAAA GGCCCGACGC TTGAGGTCCC GCCCGACCTG ACCGGCATCC AGGCTGACCG CCGCTATGCC GCACCGGACA CGGGCACGAC CACGCTGTCG GCGTATACGT CAACGGCGCC CAAGGTCACG ACGCCCGGCT CGGGCACCGA GAATGTGCTG CCTGCCGTGT CCGACATGCG TATCGAGCGT GATGGCAATC AGCGCTGGCT GCTCGTGAAG ACCACGCCGG ATGCCTTGTG GCCGCAATTG CGCACGTTCT GGCAAGAACT GGGCTTCCTG CTGGTGATCG ACTCGCCCGA GACCGGCATC ATGGAAACCG ACTGGGCTGA AAACCGCGCG AAGATTCCGC AGGACATCAT CCGCCGCACC GTCGGCAAGG TATTCGATGG CTTGTACTCG ACGTCTGAGC GTGACAAGTT CCGCACCCGC ATCGAGAAGG GTCCGAACGG CACGGTCGAA GTCTACATCT CGCACCGCGG CGCGCAGGAA CAACTGGTCG GTTCGTCCAA GGACCAGACC GTGTGGACGC CGCGTCCGGC CGATCCGGAA CTCGAAGCCG AATTCCTGTC GCGCCTGATG CAGCGGCTGG GCGCCAGCAA GGAGGCCGCA CAGCAGAAGC TCGCGCAAAC GCAGGCAGCG CACCCGGTGC AAGACGGCAC GAAGGCTGAA CCGGCCCCGC GTACCGGCCC ATCGTTGCTG ACGCAGTCGA ATGGCCAACC GGTCCTGCAG GTGCCGGAGC CCTTTGATCG CGCATGGCGC ACCGTGGGCT TGGCGCTGGA TCGCGTGAAC TTCACCGTGG ATGACCGCGA CCGCTCGCAA GGGGTCTACT TCGTTCGCTA CGCTGATACG CGTGCCGAAG CCAACGCACC GGGCTTCTTC TCGCGCCTGT TCTCGGGCAC GAAGATCGAA GACCTCAAGC GGGCCAAGCG TTACCGCGTG GTCGTGAAGG ATGCTGGCAC GTCTTCGACG GTGCTGGTGC AAAACGACGA TGGCTCCGCG CAGACCGGCG ACATCGGCAA GCGCATCCTG TCGCTGCTCG ACGAGCAACT GCGGTAA
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Protein sequence | MKLHQTRRGA VATSAQLLLA ALSVALISGC DTVNEVMQPD RIDYKSQAKK GPTLEVPPDL TGIQADRRYA APDTGTTTLS AYTSTAPKVT TPGSGTENVL PAVSDMRIER DGNQRWLLVK TTPDALWPQL RTFWQELGFL LVIDSPETGI METDWAENRA KIPQDIIRRT VGKVFDGLYS TSERDKFRTR IEKGPNGTVE VYISHRGAQE QLVGSSKDQT VWTPRPADPE LEAEFLSRLM QRLGASKEAA QQKLAQTQAA HPVQDGTKAE PAPRTGPSLL TQSNGQPVLQ VPEPFDRAWR TVGLALDRVN FTVDDRDRSQ GVYFVRYADT RAEANAPGFF SRLFSGTKIE DLKRAKRYRV VVKDAGTSST VLVQNDDGSA QTGDIGKRIL SLLDEQLR
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