Gene Rpic_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0707 
Symbol 
ID6288349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp743380 
End bp744204 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID642624270 
Producttranscriptional regulator, IclR family 
Protein accessionYP_001898290 
Protein GI187927803 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0780605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CCCGTCTCCC CGATCCCGAA TTCGACACCG CGCCCGCCGA GTCGAGCGAC 
CCGAATTTCG TCACGGCGCT CGCGCGCGGG CTGGAACTGC TGCGCGCATT CCGCCCTGGC
GACACGTTGC TCGGCAACCA GGAATTCGTC CGGCGCACGG GCTTTCCCAA GGCCACAGTC
AGTCGATTGG CCGGCACGCT GGTGTCGCTC GGTTACCTGC GCTACGACGA TGCGCTCGGC
AAATACGGGC TCGACGCCGG TGTGCTCGCA CTCGGGTTTG CCTACCTGGC CTCAAGCGAC
GTGATCCAGC TCGCGCGGCC GCATATGAGC GCATTTGCGC AGCGCTATGG GGTATCGATC
TCGCTGGGCA AGCGCGATCG GCTGGACATG GTGTATCTGG AGACGATCCG CCACGACAGC
CCGTCGATGA GCGGCTCGTC GGGGCTGGGC GTGGGCTCGC GGCTCTCGCT GCTGTCGAGT
TCGATGGGAC GGGCGTATCT GGCTTCGTTG CCCGCAGCGC GGCGTGAGCG CTTGTACGAA
GCACTGCGCA CGCAGCAGCC GGCGCAGTGG GCGGCAGAAG GGGCCGCCGC AGATGACGCT
GTCAAAGCCG GCGTACGGAA TGGCTATGCC GTGTCGCTGC GTGACTGGCA TCCGGCCATC
CACGCATGCG CAGTCGCGTT CTTCGCGCCA AGCCAGCGCG AGCCGTATGT CGTGAGTTGC
AGCGCGCCAC ACACGTCCGC CGATGCAGAG CGCATCCGCG ACGAACTGGC CCCCGCGCTG
CGAGAGTTCG CGGCAAGGCT CGGCCAAGTC GCCGAGCCCG CCTGA
 
Protein sequence
MSTTRLPDPE FDTAPAESSD PNFVTALARG LELLRAFRPG DTLLGNQEFV RRTGFPKATV 
SRLAGTLVSL GYLRYDDALG KYGLDAGVLA LGFAYLASSD VIQLARPHMS AFAQRYGVSI
SLGKRDRLDM VYLETIRHDS PSMSGSSGLG VGSRLSLLSS SMGRAYLASL PAARRERLYE
ALRTQQPAQW AAEGAAADDA VKAGVRNGYA VSLRDWHPAI HACAVAFFAP SQREPYVVSC
SAPHTSADAE RIRDELAPAL REFAARLGQV AEPA