Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0629 |
Symbol | |
ID | 6288124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 669138 |
End bp | 670064 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642624190 |
Product | rhamnosyltransferase |
Protein accession | YP_001898212 |
Protein GI | 187927725 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | [TIGR01556] L-rhamnosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTA CCACCTCCAT ACTTGAGCCC CAGGTCGATC TCTATGCCGT AGTGGTCACT TATTCGCCAG ACTGGCCTCA AACCCTCGCG CTTATTGAAG CACTAGAAAA GCAACAGGCG CTTACGATTG TCGTCGACAA TGGCTCCCCA GAAGCCATGA TCGCCCCCCT AATCGAAAAG AGCCCCCCAA GAACACGGTG GCTGCGTAAT GAAAGCAATG AAGGCATCGC AGCTGCGCAA AATCGCGGCA TTCGGGACGC GATGTCGCGC GGTGCCACGC ATATCGTCCT ATTCGACCAA GACAGCAGCC CTGCCCCGGA CATGCTTGCC CGGCTATTGA GCGCGGAAGC GACACTACTT GCGGCGGGCG CCTCCGTAGC GGCGGTTGGC CCGCAGTTGA TAGATGAAAC GACTGGCGAG AAGGCTCCCT TCATTACCTT CGAAAATGGG CACAAGCGTC GCGCAGTGAC TTCGCCCGAA AGCAGCCAGA TTCTGTGTTT CTCGCTTCTC GCATCAGGCA CGTTGATCCG CACCGAAGTA CTCGAGCGCA TCGGCCTAAT GAAAGAGGAG CTCTTCATTG AGTATGTTGA CGTGGAATGG GGTGCGCGAG CTCGCGCTGC AGGACTACAT TGCTACGGTA TCGGGGAAGC ACTGCTCTAC CATAATTTGG GCGACGATCG CATTCAGGTG CTGCCCAACT TCTTCGTCCC GCTGCACAAA CCGGTGCGTC ACTACTACAC CATGCGCAAT GCAATCTACA TGCAGAAGCT GGCCTACGTA CCGGCTTACT GGAAGCGCAG CGATCTGCTC CGGACTGTAG CGGGCTTTAT TATCTTCACA CTCTTCAATC CGCCGAGATT AATGCAACTC AGGATGATGA TTAAGGGAAT TGCGCATGGC TTTGCCGGCC GGTACGGACC TCTTTGA
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Protein sequence | MTTTTSILEP QVDLYAVVVT YSPDWPQTLA LIEALEKQQA LTIVVDNGSP EAMIAPLIEK SPPRTRWLRN ESNEGIAAAQ NRGIRDAMSR GATHIVLFDQ DSSPAPDMLA RLLSAEATLL AAGASVAAVG PQLIDETTGE KAPFITFENG HKRRAVTSPE SSQILCFSLL ASGTLIRTEV LERIGLMKEE LFIEYVDVEW GARARAAGLH CYGIGEALLY HNLGDDRIQV LPNFFVPLHK PVRHYYTMRN AIYMQKLAYV PAYWKRSDLL RTVAGFIIFT LFNPPRLMQL RMMIKGIAHG FAGRYGPL
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