| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0515 |
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| Symbol | |
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| ID | 6287251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 553265 |
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| End bp | 554398 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624080 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001898102 |
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| Protein GI | 187927615 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.815299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.447794 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCC GCCGCACCCT CTGCGCCGCC GCTGCGCTGT TGCTTGCCAC CGCAGCCCAT
GCCGAAATCG TCGTTGGTGT GAGCCTGTCG ACCACAGGTC CGTCGGCGTC GCTCGGCATC
ACGCAGAAGA ACTCGCTGGC GTTCTATCCG GACACCATCG GCGGGGAAAA GCTGCGCCTC
GTGGTGGTGG ATGACGCCTC CGACCCGAGC ACCGGCACGC GCCTGGCGCG CAAGCTCGTG
ACGGAAGACC ACGTCGACAT CATCGTTGGC TCATCGGCGG TGGCACCGTC GATTGCGATT
GCCGAAGTCG CCACTGAATC GCACACGCCG CAACTGGCGT TGGCGCCGGT CGAGCTGAAA
CCGGGCAAGG GCGATTGGAC CTACCGGCTT GCGCAGCCGA TCTCGCTGAT GGCCGAGGCG
ATTGCCACGC GCATGGAGGC GTCCGGCGTC AAGAACGTCG GCTTCATCGG CTTTGCCGAT
GCGTACGGCG AAAGCTGGCT GAAGGACTTC ACCGCCGCCG CCACGCCGCG CGGCATCAAG
ATCGTCGACG TGGAACGCTA TGCCCGCGCG GATACCAGCG TGACGGGGCA GGTCGCCAAG
CTGGTCAGCA TCAAGCCGGA TGCGATCCTG GTGGCCGGCG CGGGCACGGG CGCTGCGCTG
CCGCACACCG CGTTGCGCGA TCGGGGTTAT GCGGGGCCGA TCTACCAGAC GCACGGCGCG
GCGACGAAAG ACCTGATCCG CATCGGCGGC AAGGCGGTCG ATGGAGCCAT CCTGCCGGCA
GGCCCGGTGA TCGTGGCGGA GCAATTGCCC GACAGCCACC CGAGCAAAAA GACGGCGCTT
GAATACGTGA CGCGGTATGA GAAGGCCAAC GGCCCCGACA CGCGCACGCA GTTCGGCGCC
CACACGTGGG ATGCGCTGCA GGTGCTCCAG CGCATCGTGC CGGTGGCGCT CAAGAAGGCC
AAGCCCGGCA CGTCTGAGTT CCGCCAGGCG CTGAAGAACG CGCTGGAATC GGAGCACGAC
ATTGTCGTTT CGCACGGGGT GCTCAACTAC ACGGCCACGG ATCACTTCGG CTTTGACGCA
CGTGGCCGTG TGCTGCTGAC CATCGACCAC GGCAAGTGGA AATTGCTGAA CTGA
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| Protein sequence | MTIRRTLCAA AALLLATAAH AEIVVGVSLS TTGPSASLGI TQKNSLAFYP DTIGGEKLRL
VVVDDASDPS TGTRLARKLV TEDHVDIIVG SSAVAPSIAI AEVATESHTP QLALAPVELK
PGKGDWTYRL AQPISLMAEA IATRMEASGV KNVGFIGFAD AYGESWLKDF TAAATPRGIK
IVDVERYARA DTSVTGQVAK LVSIKPDAIL VAGAGTGAAL PHTALRDRGY AGPIYQTHGA
ATKDLIRIGG KAVDGAILPA GPVIVAEQLP DSHPSKKTAL EYVTRYEKAN GPDTRTQFGA
HTWDALQVLQ RIVPVALKKA KPGTSEFRQA LKNALESEHD IVVSHGVLNY TATDHFGFDA
RGRVLLTIDH GKWKLLN
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