| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0506 |
|---|
| Symbol | |
|---|
| ID | 6289113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 540470 |
|---|
| End bp | 541258 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642624071 |
|---|
| Product | protein of unknown function DUF1045 |
|---|
| Protein accession | YP_001898093 |
|---|
| Protein GI | 187927606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.155156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGG CGCGGGCACC CTTATCGTCA TCGATACCGG CGGCCTGGCG ATACGCGCTC
TACCTGCTGC CGCCCGAGCC GTGGTACGGG CTGGGCACAC GGTGGCTCGG CCGCTGCGCG
CGCACCAACA CCGCCATCTC CGCAGATCAG CGCGAAGCGT TTGCCTGTGA AGCCGGCATC
GATCTCGCCA CGCTCGACCG CTGGACCGAA GCGCCGCGTC AGTACGGCCT GCACGCCACG
TTCAAGCCGC CGTTCCGCCT GGCAACCGAT CGCACCGTCG ATGAGCTGGA CGCCGCGCTG
CGCCGCTTTG CACAGCAGCA GCAAGCCTTT GCGATCGAGC CCGCCTTGCA GACGCTGCGC
GGCTTCTTGG CTTGGAGGCT GCGTCATGGC GATCCCGCCC GCGACACGCT CCACCAGTTC
GCCGACGCGT GCGTCGGCGA GTTCGACGCC TTCCGCGCAC CCCCACCCCC CACTGAACTC
GCGCGCCGCC GCCGCACCGG CCTGTCAGAT GCGCAGGAGC GCCATCTTCA GCGCTGGGGT
TATCCGTATG TGTTTGATAC GTTCACGTTC CACGTCACGC TGACCGGCCG GCTCGACCAT
GCCGAGCAGC TCGCGTGCTA TCGCGCACTG GAAGCCACGC GCATGGTGCT GCCAGCCGCC
ATGCCCATCG ACCACATTGC CTTGTTCTCG CAAGCTGCCC CGGAAGCACC GTTCACGGTG
GCACGTGTGT ACCGGTTTGA TGGCAGCACC GAAGACTTCG ACGCTGCGCA GAGCGCGCTT
AGCGCTTGA
|
|---|
| Protein sequence | MEQARAPLSS SIPAAWRYAL YLLPPEPWYG LGTRWLGRCA RTNTAISADQ REAFACEAGI
DLATLDRWTE APRQYGLHAT FKPPFRLATD RTVDELDAAL RRFAQQQQAF AIEPALQTLR
GFLAWRLRHG DPARDTLHQF ADACVGEFDA FRAPPPPTEL ARRRRTGLSD AQERHLQRWG
YPYVFDTFTF HVTLTGRLDH AEQLACYRAL EATRMVLPAA MPIDHIALFS QAAPEAPFTV
ARVYRFDGST EDFDAAQSAL SA
|
|---|
| |