| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0441 |
|---|
| Symbol | |
|---|
| ID | 6287323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 471980 |
|---|
| End bp | 472939 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642624005 |
|---|
| Product | plasmid replicase |
|---|
| Protein accession | YP_001898028 |
|---|
| Protein GI | 187927541 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00642051 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000000359119 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGG CACGATACGA TTTCTACACT CACCTCAACG AAGCCGTCGT CACCACGAAC
GACTTTTCTG AAGGCACCAA ATTCCGCAAG CGCGAGAAGG TCGATCAGTT CGCATACTGC
GGCCTCAATC CAATGTATCG GAGCTACCTG AGCTTCGACC TCGACATGCC AGGTTCGGCA
TTCCGCTTCG AGGATGCACA TCTGCCTCCG CCCACGATCA TCACGATCAA TCCCGAGAAC
GCGCATTGCC ACATGCTGTA CCGTCTGGTG ACACCCGTGG CTTTCACGAA GAACGCTCGC
AGCGGTCCGC AGGACTATTT CGGAGCGATC CAGCGCGAGA TGGAAAGGCG ACTCGGTGCT
GACACCGCGT ACAACCACAC GATCACCAAG AATCCGTTGA ATCCTCGCTG GAAGGTCATT
ACCCATCCCG CCGCGAAATA CCATCTTGGC GATTTTCTCG AATGGATCGA TCTGCCAAGC
GCTCGCATCG CTGTTCCCGG TAACACGGTC TACAAGGGCA GAAATCACCA GCTATTCGAT
ACGCTGCTCC GTTGGGCATA CGGAGCCGTC CATGCGCATG CGGACGAACA ACGCTGGTAT
GCCACCGTGC ATGCGAAGGC TGAAGAGATC AATGCCATTT TCACGCAACC CCTTGGGTTT
TCCGAAGTCA GGGCCACGGC CAGATCGACA GCCAAACGGG TATGGCAGCG TCGTCACGAG
CCACACCATT CCCGTCCACG CATCTTGACG TTTACCGATG AATCATCGGA AGAACGCATG
CGTCAGGGAG CAGCCTATAC CAATGCCATT CGCCGTGAGA AATCGTTACA AACGCTGCAA
GAAGCGTTCA ACGCCTTGCG TATCGAGCAC GGTGATCAGA TCACTGTCCG CCAGCTCGTG
GACCATACGG CCATGAACAT CAAGACCGTG CGCAAGTACC TTCCCCAGAT CGTTCGATAG
|
|---|
| Protein sequence | MEQARYDFYT HLNEAVVTTN DFSEGTKFRK REKVDQFAYC GLNPMYRSYL SFDLDMPGSA
FRFEDAHLPP PTIITINPEN AHCHMLYRLV TPVAFTKNAR SGPQDYFGAI QREMERRLGA
DTAYNHTITK NPLNPRWKVI THPAAKYHLG DFLEWIDLPS ARIAVPGNTV YKGRNHQLFD
TLLRWAYGAV HAHADEQRWY ATVHAKAEEI NAIFTQPLGF SEVRATARST AKRVWQRRHE
PHHSRPRILT FTDESSEERM RQGAAYTNAI RREKSLQTLQ EAFNALRIEH GDQITVRQLV
DHTAMNIKTV RKYLPQIVR
|
|---|
| |