12 homologs were found in PanDaTox collection
for query gene Rpic_0441 on replicon NC_010682
Organism: Ralstonia pickettii 12J



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010682  Rpic_0441  plasmid replicase  100 
 
 		 319 aa  670    Ralstonia pickettii 12J  Bacteria  hitchhiker  0.00642051  hitchhiker  0.000000000000359119 
 
 
-
 
NC_007951  Bxe_A3944  putative replicase  35.08 
 
 		 332 aa  171  1e-41  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00660713  hitchhiker  0.00266774 
 
 
-
 
NC_007968  Pcryo_2482  plasmid replicase  35.05 
 
 		 293 aa  134  9.999999999999999e-31  Psychrobacter cryohalolentis K5  Bacteria  normal  0.988866  normal  1 
 
 
-
 
NC_011083  SeHA_C1599  replication protein A  29.77 
 
 		 413 aa  106  5e-22  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010659  SbBS512_D0001  Rep protein  31.02 
 
 		 311 aa  103  3e-21  Shigella boydii CDC 3083-94  Bacteria  normal  0.709461  n/a   
 
 
-
 
NC_011093  SeSA_C0001  replication protein  27.53 
 
 		 311 aa  102  1e-20  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  n/a   
 
 
-
 
NC_009516  PsycPRwf_2392  plasmid replicase  26.23 
 
 		 409 aa  94.4  2e-18  Psychrobacter sp. PRwf-1  Bacteria  decreased coverage  0.000895124  n/a   
 
 
-
 
NC_004253  pDOJH10S_p1  hypothetical protein  31.65 
 
 		 303 aa  92.4  8e-18  Bifidobacterium longum DJO10A  Bacteria  normal  0.170551  n/a   
 
 
-
 
NC_004632  PSPTO_B0001  RepA protein, putative  26.06 
 
 		 457 aa  83.6  0.000000000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.93501  n/a   
 
 
-
 
NC_004633  PSPTOA0001  replication protein RepA  25.73 
 
 		 437 aa  81.3  0.00000000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_008738  Maqu_4179  plasmid replicase  25.99 
 
 		 433 aa  68.9  0.0000000001  Marinobacter aquaeolei VT8  Bacteria  n/a    n/a   
 
 
-
 
NC_009468  Acry_3321  hypothetical protein  30.4 
 
 		 690 aa  43.5  0.005  Acidiphilium cryptum JF-5  Bacteria  normal  0.112633  n/a   
 
 
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