Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0423 |
Symbol | |
ID | 6287222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 453659 |
End bp | 454576 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623989 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001898012 |
Protein GI | 187927525 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.586718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000106922 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCTGA ACCAATTGGC GTTGTTCGTG CGCGTGGTCG AAGCGGGGAG CTTCACGGCA GCGGCAACGC GGCTCGATTT GCCTAAATCG TCCGTCAGTC GCGGCATCGC TGCGCTTGAA CAGGATTTGA ACGTGCGACT GTTACAGCGC ACCACGCGCA CGCTCCATCT GACGGACGCG GGCCAAAGCC TGTATCAGGT GGCGTCGCAC GCACTGGAAG ACATTGAGCG CGCCACGACC TGCGCAGGCG AGCTGCAGGA CCTGCCGCGC GGCAAGGTCC GGATCACGTC TTCCGAAGAC GTCGGCCGTC TGCTGGTAGC GCCGGTGGCG GCGCGCTTCA TGCAGCTGTA TCCGGAGATC GATCTGGACG TCGTCCTGAC GCCGCGCAAT GTCGATCTCG TGCAGGAAGG TTTCGACCTT GCCGTCCGCG TTGGACGCCT GGCCGATAGT TCGCTGGTGG CGCGGTCGCT TGGCGTGTTG CGCATCGGCT TGTTCGCGTC GCCCGATTAC CTGCAGCGCC GCGGTGCGCC AGACACCGTA CAAGGGCTGG CCGACCATTG CTGCCTCGAT TTTCGCGGCA CTGGACGCGG CGAAACGCAA TGGCGCCTCG TCGGCCCCGA TGGGCTGAAA ACCGTGGCTG TGCGTGCGCG CCTGAATGCC GACAGCCTGA TTTACCTGGA AACGTTGATT GCTTCAGGCG CCGGTATCGG CCCGCTGCCG CTGTATGCGA GTGCCGTGGC GCGCGCCAAC GCACCGCTGC CGCGACTCGT TCGCGTGCTG CCGGACTATG CGACCAGCGG TGAGCCGATC AACCTCGTCA CACCCTCTGC TCGGTTCGTT CCCAGGCGCG TTCGCTTGCT GATCGACATG CTGACCGAGT CGATCCGGCA AGAGCTGGAA AACGCCGATC CCACCTGA
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Protein sequence | MDLNQLALFV RVVEAGSFTA AATRLDLPKS SVSRGIAALE QDLNVRLLQR TTRTLHLTDA GQSLYQVASH ALEDIERATT CAGELQDLPR GKVRITSSED VGRLLVAPVA ARFMQLYPEI DLDVVLTPRN VDLVQEGFDL AVRVGRLADS SLVARSLGVL RIGLFASPDY LQRRGAPDTV QGLADHCCLD FRGTGRGETQ WRLVGPDGLK TVAVRARLNA DSLIYLETLI ASGAGIGPLP LYASAVARAN APLPRLVRVL PDYATSGEPI NLVTPSARFV PRRVRLLIDM LTESIRQELE NADPT
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