Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0305 |
Symbol | |
ID | 6289720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 321715 |
End bp | 324147 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642623873 |
Product | MMPL domain protein |
Protein accession | YP_001897896 |
Protein GI | 187927409 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGCT TGCACGCCCT GCGTCGCCCT GCGGTGCTGG TCTGGTTGAC TGGCCTGCTG CTGTGCGCGG TCGTGATCGG ACGTACCAGC TTTACGGCGG ACCTGTCGGC GTTTCTGCCG CGCTCGCCGA GTGCCGAGCA ACGCGTGCTC GTCGACCAGT TGCGCGAGGG GCTCGTGTCG CGCCTCATCC TCGTCGGCAT CGACGGTGGT GACGCGGCCA CCCGTGCAAC GCTGTCAAAG CAGCTCGCTG CGAGGCTGCG TGCCGACGCG CAATTCAGCG CCGTCAACAA CGGTGAGCCC GTGAGCGAAG CGCGCGACCG GCAGTTCATC TTCGACCACC GCTACGTGCT GAGCCCCGCA GTCACGCCGC AGCGCTTTTC CGCCGAAGGG CTGCATGCGG CGCTGGGCGA AAGCCTCGAT CTGTTGAGTT CATCGGCAGG GCTCGTCGCC AAGAACATGC TGCCGCGTGA CCCGACCGGC GAGGTGGCGG CACTCGTCAG CCAGCTCGAC AACACCGCGC TGCCGTCGTC GAAGCACGGC GTGTGGGCGT CACGCGATGG CCAGCGTGCC GTGCTGGTCG TGCAGACAAC GGCCGCCGGC TCCGACACCG ACGCACAGGC GCATGCCATT GATGCCGTGC GCGGCGCGTT CGATGCGGTT GCGCGCGCAG TGCCAAACGC AGCGTCAACG CGCATCCTGA TGACCGGCCC GGGCGTGTTC TCCGTCGAAT CGCGCGACAC CATCAAGCAC GACGTCGAGC GGCTTTCCGC CGTCAGCCTC GTGCTGGTGG TGGCGTTGCT GCTGACGGTA TACCGCTCGC CGCGCACGAT GGTGCTCGGG TTGCTGCCGG TGCTGTCCGG CGTGGCGGCA GGCGTGGCAG CGGTCAGCCT CACGTTTGGC GCGGTGCACG GGCTTACGCT CGGCTTCGGC ACCACGCTCA TCGGCGAGGC GGTCGACTAT TCGATCTACC TGTTCGTGCA ATCCGCCCGC CTGCACGGCG CCACTCCCCA CGACAGCCTG CGCGCATGGA TTGCCACGTA CTGGCCGACC ATCCGCCTGG GTGTGCTGAC CTCGGTGTGC GGCTTTGCGT CGATGCTGTT CTCGGGCTTT CCCGGCCTGG TGCAACTGGG GCTGTATTCG ATTGTGGGGT TGGTAACGGC CGCGCTCGTC ACGCGCTACG TGCTACCGCA TCTGCGTGGT GCAGAAGTGG CGACGCGTGA TCTCTCGCGC GTGGGAGCGT GGCTGACGCG GGCGACGTCT GCCGCACCGC GCCTGCGCTG GCTGTTGGCC GCCGTGCTCA TCGGCGCATG TGCGGCGCTT TCGCTGCATC GCGATAGCTT GTGGAGCCGC GAACTCGCCG CGTTGAGCCC CGTGCCGGCG AAAAGCCAGG CGCTCGACGC CAGCCTTCGC GCAGATGTGG GCGCGCCCGA CGTGCGATAT CTGGTGGTGA TCCCGGCAGC AACGGAACAG GCCGCGCTCG AAGGCGCCGA GAAGATCGCC ACGCAACTGC AACCGCTCGT GGACAACGGC GTGCTCGCCG GCTTCGAGAA TCCCGCGCGC TACCTGCCGA GCGATGCCAC ACAGCGCGCG CGCCTCGCGA GCTTGCCGGC GGCCGATGCA CTGGCCACAC GCATGCGCAG CGCGGTGGAA GACCAGCCGA TCCGCGTAAA ACCCGATCTC TTCGCCCCGT TCATCGCCGA TGTGGACGCG GCACGCGCGC AGCCCTTTTT GCGGCGCGCA GACCTGAAGG GCACGTCGAT GGCATTGGCG GTGGATGCAC TGCTAACAGA ACACGCCGGC CAGTGGAACG CCATGTTGCC ATTGCGCGCA CCACCAGATG CACCATCCGC CGCGCCGGCT ACCACGAATA ACGCATCCAA TCCGCCCAGC CTCGATGCCG CGCCGATTCG CGCAGCCGTT GAGCATGCGA CCGTACCCGG GGCGCTCTTC GTCGACATGA AGGTCGAAGC CGATCGGATG TACGTGAACT ACGTGCGCGA AGACCTTCGC CTCTCGCTTG CCGGTTTTGC GGCGATCGCG TTGCTGCTGA TCGTGGCGCT GCGCTCGCCG CAGCGGACCT TGCGGGCGTT GGCGCCCCTG GTGGCGGCGG TGCTGGTGGT GACGGCCGGC TTTGCACTGG CGCGCGTGCC GCTGACCATC CTGCATCTGG TCGGCATGCT GCTGATCGTG GCGGTGGGAT CGAACTACGC GCTGTTCTTC AATCAACGCG CACAGGCCAT TGCGCCGCAG ACCCTGGTGT CACTGCTGGT GGCCAACCTG GCGACGGTGG CCGGCTTCGG CCTGCTCGCG CTCTCTCGCG TGCCGATGCT CGAAACCTTC GGGCTGACCG TCGGCCCGGG CGCCATGCTT GCGCTGTTGT TCGCCGCCAT CCTCGCGCCA CGCGCCAATC ACGATCAGCA CGCCACAGCA TGA
|
Protein sequence | MKRLHALRRP AVLVWLTGLL LCAVVIGRTS FTADLSAFLP RSPSAEQRVL VDQLREGLVS RLILVGIDGG DAATRATLSK QLAARLRADA QFSAVNNGEP VSEARDRQFI FDHRYVLSPA VTPQRFSAEG LHAALGESLD LLSSSAGLVA KNMLPRDPTG EVAALVSQLD NTALPSSKHG VWASRDGQRA VLVVQTTAAG SDTDAQAHAI DAVRGAFDAV ARAVPNAAST RILMTGPGVF SVESRDTIKH DVERLSAVSL VLVVALLLTV YRSPRTMVLG LLPVLSGVAA GVAAVSLTFG AVHGLTLGFG TTLIGEAVDY SIYLFVQSAR LHGATPHDSL RAWIATYWPT IRLGVLTSVC GFASMLFSGF PGLVQLGLYS IVGLVTAALV TRYVLPHLRG AEVATRDLSR VGAWLTRATS AAPRLRWLLA AVLIGACAAL SLHRDSLWSR ELAALSPVPA KSQALDASLR ADVGAPDVRY LVVIPAATEQ AALEGAEKIA TQLQPLVDNG VLAGFENPAR YLPSDATQRA RLASLPAADA LATRMRSAVE DQPIRVKPDL FAPFIADVDA ARAQPFLRRA DLKGTSMALA VDALLTEHAG QWNAMLPLRA PPDAPSAAPA TTNNASNPPS LDAAPIRAAV EHATVPGALF VDMKVEADRM YVNYVREDLR LSLAGFAAIA LLLIVALRSP QRTLRALAPL VAAVLVVTAG FALARVPLTI LHLVGMLLIV AVGSNYALFF NQRAQAIAPQ TLVSLLVANL ATVAGFGLLA LSRVPMLETF GLTVGPGAML ALLFAAILAP RANHDQHATA
|
| |