| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0295 |
|---|
| Symbol | |
|---|
| ID | 6287578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 313383 |
|---|
| End bp | 314111 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642623863 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_001897886 |
|---|
| Protein GI | 187927399 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCTG CCAAACGCGT CCTGCTCGTT GAAGATGACG CACACATCGC GGAATTGCTG
CGCATGCACC TCCGGGACGA GGGTTATGCG GTGGTGCACG CGGCTGACGG CCATGCGGGC
CAGCGGGAAA TGGAACGGGG CAACTGGGAT GCGCTGGTGC TCGACCTGAT GCTGCCTGGC
ATCGACGGCC TGGAGATTTG CCGCCGCGCG CGGGTGCAGG CCCGCTACAC GCCAATCATC
ATCATCAGTG CCCGGTCGAC CGAGGTGCAC CGCATCTTGG GGCTGGAGCT CGGCGCAGAC
GACTACCTTG CCAAGCCCTT CTCGGTGTTG GAGCTGGTGG CGCGCGTGAA GGCACTGATT
CGACGTACCG ACGCGCTGGC GCGTAACGCG CGCATGGAGT CGGGTAGCCT CACACTAGGC
AATCTTGAGA TCGAACCACT AGCGCGCGAG GTGCGCGTCG ACGGCAAACC GATCGAACTC
ACGCCGCGCG AGTTCGACCT ACTTCATTTC TTCGCACGTC ATCCGGGCAA AGTGTTTTCG
AGGCTCGACC TGCTCAATCA AGTCTGGGGC TACCAGCACG ACGGCTACGA GCATACGGTT
AACACTCACA TCAACCGGCT GCGAGCCAAG GTCGAGGTCG ACCCGGCGCA GCCGCGGCGC
ATACTCACCG TCTGGGGGCG CGGCTACAAG CTCTCTATCG GGGCAGACGG CAAGGAGGAC
GCAGCATGA
|
|---|
| Protein sequence | MDSAKRVLLV EDDAHIAELL RMHLRDEGYA VVHAADGHAG QREMERGNWD ALVLDLMLPG
IDGLEICRRA RVQARYTPII IISARSTEVH RILGLELGAD DYLAKPFSVL ELVARVKALI
RRTDALARNA RMESGSLTLG NLEIEPLARE VRVDGKPIEL TPREFDLLHF FARHPGKVFS
RLDLLNQVWG YQHDGYEHTV NTHINRLRAK VEVDPAQPRR ILTVWGRGYK LSIGADGKED
AA
|
|---|
| |