Gene Rpic_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0085 
Symbol 
ID6288634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp98936 
End bp100576 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content64% 
IMG OID642623658 
Producthypothetical protein 
Protein accessionYP_001897682 
Protein GI187927195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCA CACCGATCGC AATCAGCGCT GCAGTGCTTG TTTTGACCGC TTGCGGCGGA 
GGCGGAGATG CTCCGCCTCA GCTAACCACG CAGCAATCGC AGACGATCAG CGGCGTGGCG
GCCACTGGCG CGGCCTTGCC CGGTGCAACG GTCAACGTGA CCTGCTCGGC GGGTTCGGGT
ACGGCCACCA CGAGAGCGGA CGGCAGCTAT TCGGCACCCA TCACGGGCGC CAGCCTGCCT
TGCGTGGTGA CGGCCACCAG CAGCGACGGC AAGACGGTGC TGCACTCGCT GGTTGCCGGT
TCAGGATCGA TCGGCAGCAC CGCCACGGCC AACATCACGC CGCTGACGGA ACTGCTGCTG
GCACAACTGG CCGGACAGGA CCCGGCAAAG TATGTGGCCG GATTCAGTTC GACGACGACC
GTGAATGCCA GCGACGTCAC CGCCGCGCAA GCTGCCCTGA TCAAGGTGTT GCAGAGCGCC
GGCTTTGACG CGTCGGGCAT CGGTGACTTC CTGGGCGGCA CGCTCAGCGC AGGCAGCGGC
CAGGGTTATG ACGGGGTGCT CGACACGCTG CAATCGAAGC TGGCCGGCGC GGGCGTCACC
CTGACCGACC TGAGCACCGC GGTTGCCAGC ACCAGCGGCA GCTCCAGCGG GTCTGCAGGC
TCGACGGTTG GCACCGTGCT GGCGCCGGCC AATTCGGCCT GTCCGGCGCT CAAGAGCGGC
GATCATCGGC TGATCAAATT CTCGGATGGT TCGGCACAGG TGGTGACCAT CGACGCGGCC
AAGCTGACCG TCGCGGTGGG CGGCTCGAGC TACCAACTGA CCCAAGGTGC GACGGCCTGC
GATTACACGT TGAACGATAC CGGTTCGACG CGCGTGCTGG TGGCCAAGTC GGGAATGGCG
GTCTGGACCA ACGGCAGCGG TGGCACGGGC GTACTTTCGC TGTCGCTTCC CAAGCAGATC
GTCGATCCGA CCGCTATCAA CGGAAACTAC ATCTATGCGC TCCTGAGCGG GGCAGGCCAA
GGCACGTTTG GCACGAATAA CTATGCGAAG GGCGTCGTGA CGGCTGCCAC GAATTGCGCG
GTCAACGCGC CTTGCGCGCC TGATCTGAAT TCACCGTATG GGCACATGGT TGCCACGTCG
GATGGTGGGG TCGACTGGGT TGATGATGGC GCCTCCGCAG GTACCGTCAA CGCCCACGCC
TATGGGTTCC GGAACGCGCA GGGGAATACG GTTTTCGTGG TTGCGCTGAC CGGGGGCGGC
GTAGGCATCT TCGCCCCGCA GACGACGCTG TCCATGCCAG CAGTCGGCAC GACCAACGCC
TTCTGGCAAA GCAACGTCAA GTCGACCGGT CTGAGCGCGG TGACGGAAGA CAGCAACACC
ATCACGGCGG TGAATGGCTC GACGGTGACA CGCACCTTTG CCGATACCCA TACGGACCAG
ATCATCTACA ACGATCCATT CGCCGGCCTG CGCCATCGGC CCGGTACCAA GGTCTGCACG
AACACGAGCG GTGTTGCGGT TACGTGCAAC GAGACGTGGC AACTGCCGTT GAGCGGCCTG
ACGCTGGCAT TGAGCGGGTC GCCGTCCGTC ACGCCATCCA CGTATCAGGT GAACTTTTCG
GTCAACAAGC CCGGCAACTA A
 
Protein sequence
MKLTPIAISA AVLVLTACGG GGDAPPQLTT QQSQTISGVA ATGAALPGAT VNVTCSAGSG 
TATTRADGSY SAPITGASLP CVVTATSSDG KTVLHSLVAG SGSIGSTATA NITPLTELLL
AQLAGQDPAK YVAGFSSTTT VNASDVTAAQ AALIKVLQSA GFDASGIGDF LGGTLSAGSG
QGYDGVLDTL QSKLAGAGVT LTDLSTAVAS TSGSSSGSAG STVGTVLAPA NSACPALKSG
DHRLIKFSDG SAQVVTIDAA KLTVAVGGSS YQLTQGATAC DYTLNDTGST RVLVAKSGMA
VWTNGSGGTG VLSLSLPKQI VDPTAINGNY IYALLSGAGQ GTFGTNNYAK GVVTAATNCA
VNAPCAPDLN SPYGHMVATS DGGVDWVDDG ASAGTVNAHA YGFRNAQGNT VFVVALTGGG
VGIFAPQTTL SMPAVGTTNA FWQSNVKSTG LSAVTEDSNT ITAVNGSTVT RTFADTHTDQ
IIYNDPFAGL RHRPGTKVCT NTSGVAVTCN ETWQLPLSGL TLALSGSPSV TPSTYQVNFS
VNKPGN