Gene Rpic12D_5379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5379 
Symbol 
ID8007876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp269432 
End bp270340 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content57% 
IMG OID644822586 
Producthypothetical protein 
Protein accessionYP_002973846 
Protein GI241114371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.183725 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGTG CTACAAAAAG CACGCATTGG GGGAAGGTTT GGCTTGCTGG GGCGCTTGCC 
TGGCTGTGTT CCACAACTGC GCTTGCCGGC GAATCGCCGT TCGGGTGGAT TTACACGGCC
GACGTTATGC CCAAAGGCCG CTTCGAATTC GAGCACCAGT CTTTCCTGCA GCGGGGCCAG
TCCCAAGGAT CCTATAGCGG ATTGCTCAAC CGCGAAGAAG TCGAGTACGG CGTGACGGAC
AAATTCCAAT TGGCCGGCTA TTTCAACTGG AGCTACGTGA ACGCCAATCG GAATGGTCTT
GATGGCACCA CGCGTGGGCC GCTGACAGAT CTCGGTCCCA ATGACGATCC GACTGGGCGT
TACCGCAAGA CTCGCTTCGA GACTGTTTCA CTCGAAGCGA TCTACCAACT CATGAACCCA
GTGACTGATC CGATCGGCTT GGCACTGTAC ATCGAGCCAG AACTGGGGCC CCGTGAGCGC
GATCTCGAAT GGCGCATCAT CTTGCAGAAG AACTGGTTGG ATGATCGGCT CATTTTTGCC
GCCAATATTC TCGGTGCCCA TGAGCGCGAC AAAACCGCCA TGGGTGATAT TGAGCGTGCT
TCCATGCTTG ATCTGACCGC CGGCGTGTCC TATCGCTTGA CCGACAACCT GAGCCTGGGC
ATGGAGGCGC GCAACCATCG TGAATTCCAG GGGTATCGCT ATAACCGTCG TGATCACTCC
GCGTGGTTTC TTGGCCCCAA TTTGCACTAC GCCACCAAAC ACTGGTGGGT AACGGCCGCG
TGGCGCCACC AATTGCCCGT AGTCAAAACC TACAACGAGG ACCAGGCGGA CGTAGTGGCA
GGCAACCGTA TCTTCGGTGA CGAGCATGCG CGCAACGAGT TCATGGTCAA GGTGGGGTTC
CCATTTTGA
 
Protein sequence
MQGATKSTHW GKVWLAGALA WLCSTTALAG ESPFGWIYTA DVMPKGRFEF EHQSFLQRGQ 
SQGSYSGLLN REEVEYGVTD KFQLAGYFNW SYVNANRNGL DGTTRGPLTD LGPNDDPTGR
YRKTRFETVS LEAIYQLMNP VTDPIGLALY IEPELGPRER DLEWRIILQK NWLDDRLIFA
ANILGAHERD KTAMGDIERA SMLDLTAGVS YRLTDNLSLG MEARNHREFQ GYRYNRRDHS
AWFLGPNLHY ATKHWWVTAA WRHQLPVVKT YNEDQADVVA GNRIFGDEHA RNEFMVKVGF
PF