| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5357 |
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| Symbol | |
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| ID | 8007854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | - |
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| Start bp | 248944 |
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| End bp | 250245 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644822565 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_002973825 |
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| Protein GI | 241114350 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTTTC CACGTCGCCT GACGCTGGCG TTGCTTTGCG CGCCTGCCTT CGGCATCGCG
ATGTCGCATG CCGCGACCTC GCAATCTGTC CCTACGCTTT CCGTTGAGGA AACCGTCGCG
CTCGCCACCG CGCATGCCGG CGACGCCGAA TCCTCGCGCG GGACCATCGA CGCCGCGACC
CAAATGGCGG TCGCCGCCGG CCAATTGCCG GACCCCGTGC TCAAGCTCGG CATCAACAAC
GTGCCGGTCA ATGGCCCCGA CCAGTTTTCG GTCAGCCGGG ATTTCATGAC CATGCGCTCC
ATCAGCGTGA TGCAGGAATT CACACGCCCG GACAAACGCC GCGCCAAGGT GGCACGCTTC
GAAGCGGAAG CCGACGCTGC CGAAGCGCAG CGCGCGGTCA GCATGGCCAA CGTGCAGCGC
AACGCCGTCA GCGCATGGCT GGACCGCTGG TATGCCGAGC AGACGGGGAC CTTGCTGGGC
CACCATGGAC ACCCACTTGA ACTTGCGTTG CAGGCGGCGA CCGCCGCGTA TCGCAGCGGA
CGGGGCACGC GCGCCGACGT GCTGGCGATG GAACTGGAAA TCCAGAAGCT GCAGGACCGC
CTGGACGAAA ACCGCGCCGC CGTGGCGGCC AGCGCCGTCG CGCTAGAGCG CTGGATCGGT
CCGGCCGCCA CCCGCCCGCT CTCCGAGCCG CCGCGCCTGG ACGTTCCCCT GCCGGTCGAG
CGGTTGGCGC GCGGTGAGTT GGATACCGTG CCTGAGGTCG CCGCCGCGCA ACGCGAGGTG
GGTCTGGCAG AGAGCGAGAT CCGGGCCGCT GCGCAAGCAA AGAAGCCAGA TATCACGGTC
GAGCTGATGG TCAGCCAGCG CGGCTCCGCG TTCTCGAACA TGGGCTCCGT GAACGTCAGC
TTTCCGCTGC CTTGGGACCA GGGCAACCGG CAGGACCGCG AAGTCGCGGC CAGGCTGGCC
CAGGCCCAGG CGGCACGTGC CAAGTCCGAA ATCCTCCGGC GCGACACCCA GGCCATGGTC
GGCGCCAAGC TGGCCGAGCT GCAGCGCAAT CTCGAACGGC TCAAGCGCTA TGACGAGAAG
ACCTTGCCGC TCGCCAGCAC GCAGGCGGAG GCGGCCCTGA CAGCCTACCG CGCCAATACC
GGATCGCTGC TGGCCGTGGC CGAGGCCAAT CACCGCGCCA TCGATACGGA ATTGGAACGG
CTCGCGCTGG AAGCCAAGAC GGCCAAGCTG TGGGCCGATC TGACCTTCCT GGTTCCGCTG
CCCACCGCGC AGACCGAGTC CGCCATCAAG GAACGCAAAT GA
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| Protein sequence | MLFPRRLTLA LLCAPAFGIA MSHAATSQSV PTLSVEETVA LATAHAGDAE SSRGTIDAAT
QMAVAAGQLP DPVLKLGINN VPVNGPDQFS VSRDFMTMRS ISVMQEFTRP DKRRAKVARF
EAEADAAEAQ RAVSMANVQR NAVSAWLDRW YAEQTGTLLG HHGHPLELAL QAATAAYRSG
RGTRADVLAM ELEIQKLQDR LDENRAAVAA SAVALERWIG PAATRPLSEP PRLDVPLPVE
RLARGELDTV PEVAAAQREV GLAESEIRAA AQAKKPDITV ELMVSQRGSA FSNMGSVNVS
FPLPWDQGNR QDREVAARLA QAQAARAKSE ILRRDTQAMV GAKLAELQRN LERLKRYDEK
TLPLASTQAE AALTAYRANT GSLLAVAEAN HRAIDTELER LALEAKTAKL WADLTFLVPL
PTAQTESAIK ERK
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