Gene Rpic12D_5160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5160 
Symbol 
ID8007740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp58083 
End bp58991 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID644822372 
Producthypothetical protein 
Protein accessionYP_002973632 
Protein GI241114157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.651921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTGA TTCGCAGCAT TCAAGCCGAT GCGATCGAGG TGTCGACCAG CGTTTCGTCG 
TTGCTGCGCA AGTGCAAGCT GCTGGCCTCG CGTGTGGGGC ATACCCAGCT TGAGCAGTGG
GTGGATTTGG AGTTGCGCGG CTATCCCGAG GGTGCGGACC TGCCACCCTA CCGTGTGACA
CCCGTTGTTT CCTACGGCAG CTTTGTGGGA CCGTTTGGCA TGAACGCGCC CAGGCTGCAG
GTGCCAGTCT TCCTACTGCC AGAGCATTTG CGGGAATGGC ATTCAATTGC GCGGTTGGCG
CAGGCCGTGA GCACCTACGA GAATCTGGTG CAAGGCAACA AGCCGTCTTA CGTCAAGACG
GATTGGAACG TGGCGCTGGC GATCAAATAT GCGTCTAAGC TGACCCCGGA CATGCAGTGC
GTCGAGGCAT GGATGGAGAT TCCGATTGGG GCGATCGACC GGTTGCTCGA TTGCATCAAG
ACGGCCGTTT TGGGCTATGC CATCGAATTG GAAAAATTGA GCCCGGACGC TGGTGAGCTG
CCGGTCGGCT CGAAACCGAT CAGTGAGGAA CGATTGACTC AGATCTTCAA TACCCACATC
GGGGGCAACG TCGGCAACAT AGCCAACGCA GGCACGGGCG TCACGCAGAC AGCCAACGTG
CAGGTGGGGC AGGGCGACTG GGAGGCGCTG AGCCTCTACC TGCAGTCGCT CGGACTGTTA
GAGGCCGATT TTGCAGGCCT CAAACACGAT CTCGATGCAG AACGCGCAGC TGGATCTGGC
ACGTCCGAGA AATCAAAGTC GTGGATTGGC CAACTGGTCG GCAAGGCGTT CAACAAGGCG
ACAGGGGTTG GTGTCGAGGC GATCGCCGGC GGTATCGCCC AGGCGATCTC TGGCTACCTT
GGGCAATAG
 
Protein sequence
MSLIRSIQAD AIEVSTSVSS LLRKCKLLAS RVGHTQLEQW VDLELRGYPE GADLPPYRVT 
PVVSYGSFVG PFGMNAPRLQ VPVFLLPEHL REWHSIARLA QAVSTYENLV QGNKPSYVKT
DWNVALAIKY ASKLTPDMQC VEAWMEIPIG AIDRLLDCIK TAVLGYAIEL EKLSPDAGEL
PVGSKPISEE RLTQIFNTHI GGNVGNIANA GTGVTQTANV QVGQGDWEAL SLYLQSLGLL
EADFAGLKHD LDAERAAGSG TSEKSKSWIG QLVGKAFNKA TGVGVEAIAG GIAQAISGYL
GQ