Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5150 |
Symbol | |
ID | 8007730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012849 |
Strand | + |
Start bp | 50099 |
End bp | 51376 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644822362 |
Product | cation diffusion facilitator family transporter |
Protein accession | YP_002973622 |
Protein GI | 241114147 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.634213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGATT TCTACGACGC GCCGTTCGCC AGCGGCCATG ACCACGTGTT CTTGGGTGCC GGGCACGAGA AGAACGAGCG CAAGACCTGG GCGGTGATCG TCTTGTGTGC CCTGATGATG GCCGTTGAGA TCATCGGCGG CAGCGTGTTC GGCTCGCTGG CGCTGGTGGC CGATGGTCTG CATATGTCGA CGCACGCCGG GGCCATGCTG ATCGCGGCGC TGGCTTACAC CTATGCGCGC CGGTATGCGC ACGACCCGCG TTTCGTGTTC GGCACGGGCA AGCTGGGCGA TCTAGCGGGT TACACCAGCG CCATCATCCT GGCGATGATT GCGCTGCTGA TCGGCTACGA GGCGGTGGCG CGGTTCTTCT CGCCAGTGCC GATTCACTTT GCCGAGGCGA TCCCGATTGC GATCGTCGGT CTGCTGGTGA ACATCGCCAG CGCGTGGCTC CTGAGCGGCG GCGACCACCA CGGCCACAGC CATGGCCATT CCCATGGCCA CCATCACGGC GCCGCTCATG ACGATGCGCA CGACCACGGC GAAGACGTGC AGCACATCAC CACGCCCGCT GGCGTGCTGG CTCTGTCGAT CTTCGAGGAT GGCGTGCCCC CTGTTTTCCG CCTGGCTGCG GAAGCCGCCG TGCTGCCGAA TGACGCGGCG ACGGTGACCA CGATCCGCCC TGATGGCGCC CGTCAGGAAT TCGTACTGGC CCGCAAGTCC GACGTCCTCG AATCCACCAC GGACATTCCG GAACCGCATG CCTTCACTGC CGTGCTCAAG CTTGGCGGGC AGGAGCACAC CGTCGTCTTT GAAGAGCACG ACCACGGCTA CGGTCACGAA GGGCACCATC GCGACCACAA CATGCGTGCC GCCTACGTGC ACGTGCTGGC GGATGCCTTT GTCTCGGTGC TGGCGATCAT TGGCCTGCTG CTGGCCAAGA CCTTCGGCTG GCTGTGGATG GACCCGCTGG CAGGCGTGGT GGGCGCACTG GTCATCGCCA ACTGGTCATA CGGGCTGCTG CGCGACACTG GTGGCATCCT GGTCGACATG ACGCCGGACA AGCACATCGC CGGCCGCATC AAGATCGCCC TGGAAGCCGA CGGCGACACG CTGCTCGACC TCCACGTGTG GCGTATCGGG CCCGGGCATC TCGGCGCGGT GGTGTCGGTG GGTACCCGCC AGGTGCAGCG CGGGCCGCAG TTCTATCACG GGCTCCTGCG GCGGTTCAAT ACGCTGTCCC ACGTTACGGT GGAAGTGCAT CCGCTGCCGA CCAAATAG
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Protein sequence | MSDFYDAPFA SGHDHVFLGA GHEKNERKTW AVIVLCALMM AVEIIGGSVF GSLALVADGL HMSTHAGAML IAALAYTYAR RYAHDPRFVF GTGKLGDLAG YTSAIILAMI ALLIGYEAVA RFFSPVPIHF AEAIPIAIVG LLVNIASAWL LSGGDHHGHS HGHSHGHHHG AAHDDAHDHG EDVQHITTPA GVLALSIFED GVPPVFRLAA EAAVLPNDAA TVTTIRPDGA RQEFVLARKS DVLESTTDIP EPHAFTAVLK LGGQEHTVVF EEHDHGYGHE GHHRDHNMRA AYVHVLADAF VSVLAIIGLL LAKTFGWLWM DPLAGVVGAL VIANWSYGLL RDTGGILVDM TPDKHIAGRI KIALEADGDT LLDLHVWRIG PGHLGAVVSV GTRQVQRGPQ FYHGLLRRFN TLSHVTVEVH PLPTK
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