| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5110 |
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| Symbol | |
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| ID | 8007896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 13389 |
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| End bp | 14276 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644822328 |
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| Product | extracellular solute-binding protein family 3 |
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| Protein accession | YP_002973588 |
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| Protein GI | 241114113 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00738161 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATTCGAC TACTCGCATT TGCCGCGCTC GCCACTGTGC TCGGCAGCGC AACCGCGCAG
GAGACCGGGA CGCTGGCGAA GATCAAGCAA ACCGGCGTGA TGACCTTGGG CGCGCGCGAA
GCTTCCATTC CATTCAACTA CCTCGATGAC CATCAACGGC AGGCGGGGTA CGCATGGGAG
CTTTCCACCC GGATTGCCGA CGCGGTGAAG AGGCAACTCA AGTTGCCCAA GCTCGAGATC
AAGGAAATCA ATCTCACCCC GCAGACCCGC GTGGCGCTGG TGGCCAATCA AACCGTGGAT
CTCGAGTGCA GCTCCACCAC CAACAATCTG GAGCGCCAAA AGCAGGTCGC GTTCTCAAAC
ACGTTCTTTA TCGTTGGTGC GCGATTGCTC GTGCGCAAGA ACTCCGGAAT CCAGCATTGG
GCAGACCTGA TTGGCAAGAA CGTGGTGGTC AGCGCCGGCA CCACCGGTGA GCGCTTGCTC
CGCAAGCTCA ACGTCGAGAA CAGGTGGGGC ATCAACATCA TTCTCGCCAA GGACATCAAC
GAGAACTTCC TGACCGTCGA GACTGGCCGG GCGGTGGCAT CAATGCAGGA CGACATCATC
CTTTACAGCA ACATCGCCCG CGCGAAAGAC CCGTCGATGT GGGAAGTCGT TGGCATGCCG
CAACAGCGCG AAGCGTACGG CTGCATGCTG CGAAAGGACG ACCCAGCGTT CAAGAAGCTG
GTGGACGACA CTATCGCCGC CATGATGAAG AGCGGCGAAA TGGAAGCGCT GTACAAGCGC
TATTTCCAAT CCACCATCGC AGTCAAGGGA GGCTTGCGCA TTGATCGCCC GCTATCGCCC
GAGATGCTGG ACCTCTTCAA GCATCCGAAT GACAAGGCGT TCCAGTAA
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| Protein sequence | MIRLLAFAAL ATVLGSATAQ ETGTLAKIKQ TGVMTLGARE ASIPFNYLDD HQRQAGYAWE
LSTRIADAVK RQLKLPKLEI KEINLTPQTR VALVANQTVD LECSSTTNNL ERQKQVAFSN
TFFIVGARLL VRKNSGIQHW ADLIGKNVVV SAGTTGERLL RKLNVENRWG INIILAKDIN
ENFLTVETGR AVASMQDDII LYSNIARAKD PSMWEVVGMP QQREAYGCML RKDDPAFKKL
VDDTIAAMMK SGEMEALYKR YFQSTIAVKG GLRIDRPLSP EMLDLFKHPN DKAFQ
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