| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5100 |
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| Symbol | |
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| ID | 8007886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 2379 |
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| End bp | 4301 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644822318 |
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| Product | copper-resistance protein, CopA family |
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| Protein accession | YP_002973578 |
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| Protein GI | 241114103 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0626586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAGCA ATCGTGCAAT GGGCGTGGTG CTTCCGAACC TTCCTCGGAG GCGATTTGTG
CAGGGCTTGG CAGCCGGAGG GGTGATCGCC GGCCTGGGTT TAAGCGGGAT GCCCGCGCGG
GCGTCGCAAC CCCAGGGCGC GGCCTTTGGC ACTGCGCCCG TGCTGCGAGG CACGGAGTTC
GATCTGGTGA TCGCCGAGAC CCCGGTGAAC TTCACCGGCA AGCCAGGCAT GGCCACCACC
ATCAATGGCA TGCTGCCCGG CCCGACGTTG CGTTGGCGTG AAGGTGACAC GGTCACCATC
CGGGTAACCA ACCGCCTGCC GGAGCCCACG TCAATTCACT GGCACGGCAT CATTCTGCCG
TTCCAGATGG ACGGCGTGCC CGGGATCAGC TTTTCTGGGA TCGCTCCGGG CGAAACATTC
ACGTATCGCT TCAAGGTACA GCAGAGCGGC AGTTACTGGT ACCACTCGCA CTCCGGCTTC
CAGGAAATGA CTGGGCTGTA TGGGGGCATC GTTATCGACC CCGCGGGCGA GGACCGCGTG
CGGGCCGATC GCGATTACAC CGTCTTGCTC TCCGACTGGA CGGACGAGGA TCCGATGCGC
GTCCTAACCA AGCTCAAGAT CCAGGGCGAC TACTACAACT ATAACCAGCC GACCGTGGTC
GATTTCTTTC GCGACGTCTC GCGTGAGGGA TGGACCTCTG CCATGGACAA GCGACGGATG
TGGAACCAGA TGCGGATGAA TCCGACCGAT CTGGCGGATC TCTCCAGCGC AACGCTGACC
TACCTCATGA ATGGCGTGAC GCCAGCGGGG AATTGGACCG GCCTATTTTC TCCGGGCCAG
ACGGTACGGC TGCGCTTCAT CAATGGGGCC GGCAACACGT TCTATGACGT TCGCATTCCG
GGCCTGAAAA TGAAGGTGGT GCAGGTCGAC GGACAGGATA TCGAGCCGGT GTCGGTCGAT
GAGTTCCGCT TCGGCCCTGG CGAGACCTGC GACGTAGTGG TCGCTCCAAC GGACGAGGCC
CACACAGTGT TTGCCCAGAC GATGGACCGG ACCGGGTACG CCCGCGGCAC TCTCGCCGTG
CGTCCGGGTG TGCAAGCCCC TGTGCCAGCT GTCGACAAGG CCGAATGGCT GACGATGGCG
GATATGATGG GTGACATGGG TGACATGTCT GGGATGTCTG GGATGTCTGG GATGTCTGGG
ATGTCTGGGA TGTCTGGGAT GTCTGGGATG TCTGGGATGT CTGGGATGTC TGGGATGTCT
GGGATGTCTG GGATGTCTGG GATGTCTGGG ATGTCTGGGA TGTCTGGGAT GTCTGGGATG
GACCATGGCG CCATGGTCAT GGACCACAGC CAGCATGGAA CGATGCAGGG CAACGTCGCA
AACTCCTTGA AGGTGCCGAG CAAGAAGGCC CGTCATGCGC GAACAGAGTA CGGTCCAAGC
ACCGACATGC ATGTCGATAT GGCGCGGACA AACCTCGACG ATCCCGGCAT TGGGCTGCGC
AACAATGGGC GACGCGTGCT GGTCCTGCAG GACATGCATA CGATCGGCGG CCCCATGGAC
GCCCGCAGCC CGCAGCGCGA GGTGGAGTTG CATTTGACCG GCAACATGGA GCGCTACGCA
TGGTCGCTCG ACGGCGTTGA GTTCGGCAAA TCAACCCCCG TCCATTTCCG CTATGGGGAG
CGTCTTCGCG TCATCCTTCA CAACGATACG ATGATGACGC ACCCGATGCA CATGCATGGG
ATGTGGAGCG AACTCGAGGC GCCGGACGGT ACATTCTTGG CGCGCAGGCA CACGATTCCG
GTGCAGCCCG CGCAGCGCGT TAGCTTCCTT GTCACGGCTG ACGCTCTGGG ACGATGGGCT
TGGCATTGCC ATCTCATGCT GCATATGGAT GCAGGTATGT TCCGTGAAGT GATCGTCGCC
TAA
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| Protein sequence | MRSNRAMGVV LPNLPRRRFV QGLAAGGVIA GLGLSGMPAR ASQPQGAAFG TAPVLRGTEF
DLVIAETPVN FTGKPGMATT INGMLPGPTL RWREGDTVTI RVTNRLPEPT SIHWHGIILP
FQMDGVPGIS FSGIAPGETF TYRFKVQQSG SYWYHSHSGF QEMTGLYGGI VIDPAGEDRV
RADRDYTVLL SDWTDEDPMR VLTKLKIQGD YYNYNQPTVV DFFRDVSREG WTSAMDKRRM
WNQMRMNPTD LADLSSATLT YLMNGVTPAG NWTGLFSPGQ TVRLRFINGA GNTFYDVRIP
GLKMKVVQVD GQDIEPVSVD EFRFGPGETC DVVVAPTDEA HTVFAQTMDR TGYARGTLAV
RPGVQAPVPA VDKAEWLTMA DMMGDMGDMS GMSGMSGMSG MSGMSGMSGM SGMSGMSGMS
GMSGMSGMSG MSGMSGMSGM DHGAMVMDHS QHGTMQGNVA NSLKVPSKKA RHARTEYGPS
TDMHVDMART NLDDPGIGLR NNGRRVLVLQ DMHTIGGPMD ARSPQREVEL HLTGNMERYA
WSLDGVEFGK STPVHFRYGE RLRVILHNDT MMTHPMHMHG MWSELEAPDG TFLARRHTIP
VQPAQRVSFL VTADALGRWA WHCHLMLHMD AGMFREVIVA
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