Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5077 |
Symbol | |
ID | 8017366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 369700 |
End bp | 370704 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644828765 |
Product | plasmid encoded RepA protein |
Protein accession | YP_002979965 |
Protein GI | 241589940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0739212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGACG AAGACTCCAA GAAGCCCTCC CAACTGGTCA TAGTGCCTCG CGATTCCGCT GCGGAAAGCA AGCGCGCTCG GGAGCGACGG TTCACCGCTT TGTATGAAGA GGCCTTGGCT ATTGAGGCGG AAGATGCAAA GAAGGCTGGC CAAATTGGGT TTGTGGCCAA GTGGATGGTC CACGCCACTC TTCCGTACGT ACAGCCGAAG AATAATCCTC CAGCGTGGGG GCGGAACAGC GGCAAGGTAA GTCTGCTAAT TCAGCCTGGC CACTACATGA AACGGGTGGA GACGATCGTT CGTGGCAAGC CCAAGATCAC CCAGGAAGCC GTGTCTATTG GGTATCCGTA CGGGGCATAT CCCCGACTGA TCCTGGCTTG GATAGCGACC GAGGTGGCTA AAACGGGTGA CCGCGAACTG GTACTGGGCA ACTCGCTCAG TGAGTTCATG AGCAACATCG GCAGAGACAC TGTGTCGGGA GGAAGCCGAG GTAACCTCAC CTTGATGCGC AACCAGATGC AACGGTTGTT TGCCGCCAAT ATCGCGGTGA CGAGCGACCC GGATGCGGTG GCCTGGCAGA CGGATGGTTT TCGGATTGTG GACAACGCGA ATATTGAGAT CTGGTGGAAT CCACACAACC CCGATCAAGG ATCTCTCTGG CAGTCGCGCC TACGCCTGAC TGAGCGGTTC CACGAAACGC TGTCGAAGAG TCCTGTGCCC GTCGACCTGC GGATTGTGAA GGCACTGTCT CGCTCCGCGA TGGCCATCGA TATCTACTGC TGGTTGACCT ATCGATACGC AATTATGGAC AAGTCGACCA AGATTCCATG GGAAGCTCTG ATGCTGCAGT TCGGCTCGGA GTCGTCACCA CACAAGTTCA AGGAAAACTT CCTCAAAAAC CTAAGGGATG TGAAGGAGGT CTACCGGGAT GCGAAGCTCG ACTACGACAA ATCGGGCATT CTGTTACTTC CGTCACGCCC CTCGGTTCCT AAGCGCATCG CTTAG
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Protein sequence | MKDEDSKKPS QLVIVPRDSA AESKRARERR FTALYEEALA IEAEDAKKAG QIGFVAKWMV HATLPYVQPK NNPPAWGRNS GKVSLLIQPG HYMKRVETIV RGKPKITQEA VSIGYPYGAY PRLILAWIAT EVAKTGDREL VLGNSLSEFM SNIGRDTVSG GSRGNLTLMR NQMQRLFAAN IAVTSDPDAV AWQTDGFRIV DNANIEIWWN PHNPDQGSLW QSRLRLTERF HETLSKSPVP VDLRIVKALS RSAMAIDIYC WLTYRYAIMD KSTKIPWEAL MLQFGSESSP HKFKENFLKN LRDVKEVYRD AKLDYDKSGI LLLPSRPSVP KRIA
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