Gene Rpic12D_5030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5030 
Symbol 
ID8017457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp314029 
End bp315354 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content60% 
IMG OID644828718 
Productprotein of unknown function DUF1173 
Protein accessionYP_002979918 
Protein GI241589893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.015581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCG ACCCTGACGT TCGAATAGGC TCACTTCGCG TAAAGCTTTC CGCACTGCGC 
GAGGCGCCTG CTCGCTACTC TCGCTATTTC GAAGAGGCCA AAGTCAATCC TGGCCACGGC
TGGTGCCTGT GTGGCCCCGC CCCCCAACGA TTGGTGATTC GGCGCAAGTC TCAGAGCGGC
TCTGCTGCGG TCTTCTTCTT GGCCGGGTGG CCAGATGAGG GCGAGGCCCA CGATCCCCAG
ATGTGCCCGT TCCACAAGGA ACCGGAACAC GAATCTGGCC AGACGTCTGA AAGCAAATCC
TGCTTCGCGG AAGCGGCCGA CGGCACATTC CGCATCACGC CCGCATACTC GGTGTCGCTG
AAAATCAGCG CAGCTACCCG CACCCTCGAT CCGATCGAAC AGTCAGACAA ACCCTCGAAG
TCCACGCGTG GGGCCACTCT ACTAGCGACG CTGCAGTACC TCTGGAACGA GGCAGGACTG
CACCGATGGC GCGCCGGTTG GCAACGCGAT TGGGGGCGTG TCCGCTATGA ACTCGAAGCG
ACTGCGCAAA ATGGGAAGAT CGGGAAGCGC GCTCTCGCGG ACTTGCTCTA TGTGCCGCCA
CGCTACTCGC CGACGACGGC AAATAAGGCC AAGGAAGAGC TCGGCGCCCG CTTGGCCCCC
CTTATCTCTT CCGCCAAATC CTTTCTGGAG GCACAGAAGC GAGTCTCGGC CGGCAAATCA
GCCTCTGCGG AGCGTGAAAC TCTCTTCATC ATTGCCCCTC TTCGCTCGCT CGAACTGGGG
CAGTACGACA GCTATATGCT CCACCTCCGG CATATTGGCC AACCTGTGTA CTGCAAGTCG
TCCCTCATGG AGCGCCTGAA GCATCGGTTC GGTCGATCGT TGGACACACT GTCCGTGGGC
GAAGGTCACG TTGTTGGAAT CTTCCACGTC GAAGGCACCC CGCGCGGCCA CCTCCAGCTG
ATTGATGCGG GGTTCATGCG CGTCTCAAGT CGGTTCATTC CGGTGGAGTC CTCCTACGAA
GAATTGGTCG CTGATGCGCT TGTTGCAGCT GACCGCGCTT TCACGAAGCC GATCCGCCTG
GAGATGGGTG ACGACACGCT TTCTGGCAAG GTGCTTCCCG ACTTCATCCT CTATGACACG
ACAGCACCTC GGTGCTACAT GGAGGTCTTC GGCGTCCGAG GGCGGGAAGA CTACGATGCG
CGCAAGCAGG AGAAACGCCA GGTCTACGAT CGGGCCGGTG TGTTGCTATG GGACTGGGAT
CTCTCGGTGT CCCAAGCGAT GCCACCGCTA CCAATTCGGG TCGTCCGAAA AGGAGGTCTC
ACCTAG
 
Protein sequence
MTADPDVRIG SLRVKLSALR EAPARYSRYF EEAKVNPGHG WCLCGPAPQR LVIRRKSQSG 
SAAVFFLAGW PDEGEAHDPQ MCPFHKEPEH ESGQTSESKS CFAEAADGTF RITPAYSVSL
KISAATRTLD PIEQSDKPSK STRGATLLAT LQYLWNEAGL HRWRAGWQRD WGRVRYELEA
TAQNGKIGKR ALADLLYVPP RYSPTTANKA KEELGARLAP LISSAKSFLE AQKRVSAGKS
ASAERETLFI IAPLRSLELG QYDSYMLHLR HIGQPVYCKS SLMERLKHRF GRSLDTLSVG
EGHVVGIFHV EGTPRGHLQL IDAGFMRVSS RFIPVESSYE ELVADALVAA DRAFTKPIRL
EMGDDTLSGK VLPDFILYDT TAPRCYMEVF GVRGREDYDA RKQEKRQVYD RAGVLLWDWD
LSVSQAMPPL PIRVVRKGGL T