Gene Rpic12D_5026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5026 
Symbol 
ID8017453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp310444 
End bp311214 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content57% 
IMG OID644828714 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002979914 
Protein GI241589889 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.600778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGTG ATCACATGGT GCGTTCTGAG TTCCTATCGA GAAAGGTTCG GCTTGCTGTG 
ATTGGCGCCG GCGGGAATGG TAGTGCGATT CTCGCTGCGC TGGCCACGTT GAACTATGCA
ATTGTGGAAC TCGGACATCC GGGGCTCGAA GTCACTGCGA TCGATGGCGA CACGGTGTCG
CCGTCGAATA TCGGCAGACA GGGGTTCTAC CCCTGTGACG TCGGGCAGTT CAAGACCGAC
GTTCTGATTC AGCGAATCAA CATGGGGTTT GGTACTCAGT GGCGGTCGGT GCCGGAAATG
TTCGACGGCT ACAACGTCGA TGTCTACAAG ACCGACATGG TGATTTCCTG TGTGGACTCT
CGGCGAGCGC GGAACTTGAT CGCTAAGACG TTCAAGCAGG GGTACTACAT GGACCTCGGT
AACAATGCAG CTACCGGTCA GGTGGTTGTA GGAGAGTTCG GGAATGGCCA CGGCCGTCAG
GAGCGACTGC CTCACGCAGT TGATCTGTTC CCCGAGATCG CCGATACAAC CATTCCTGAA
GACGATCAGC CGTCGTGCTC GATGGCCGAG GCGCTTGAAA GGCAGAACCT GTTCATCAAC
CGGATGATTG CAGGTTGGGC CTCAGAGCTC CTTTGGCAGA TGTTTCGCTA TGGCAAGTTG
TCCTTCCACG GCAACTTTGT CAACTTGCAG TCGGGGCGCG TTGCTCCGAT TCCGGTTGAC
GAAGAAGTCT GGTCACGGAT GGGGTACTCG CCAATGCCGA AAGCGGCGTA G
 
Protein sequence
MQRDHMVRSE FLSRKVRLAV IGAGGNGSAI LAALATLNYA IVELGHPGLE VTAIDGDTVS 
PSNIGRQGFY PCDVGQFKTD VLIQRINMGF GTQWRSVPEM FDGYNVDVYK TDMVISCVDS
RRARNLIAKT FKQGYYMDLG NNAATGQVVV GEFGNGHGRQ ERLPHAVDLF PEIADTTIPE
DDQPSCSMAE ALERQNLFIN RMIAGWASEL LWQMFRYGKL SFHGNFVNLQ SGRVAPIPVD
EEVWSRMGYS PMPKAA