Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4958 |
Symbol | |
ID | 8017239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 249112 |
End bp | 250443 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828646 |
Product | Rieske (2Fe-2S) domain protein |
Protein accession | YP_002979846 |
Protein GI | 241589821 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.879177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.275764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCC ATGAAGAGAA TGAACTGTTG TGCCGAGTAG AAGGCGATGC CCCGATGGGG AAGCTGATGC GCCAGCACTG GACCCCTGTT TGCCTGATTG AAGAAGTCAG CGAACCGGAC GGCGCGCCGG TCAAGGCTCG CGTTTTTGGT GAAGACCTGG TCGTGTTCCG CGACAACGAG GGGCGCGTCG GTGTGATGGG CGAGTATTGC CCGCACCGCC GAGCATCGCT TGTGTACGGT CGTAACGAAG ACGGTGGCCT GCGCTGCCTG TACCACGGCT GGAAGTTCGA CGTGCTGGGC AATGTGCTGG AAATGGTGTC CGAGCCGGCC GCCAGCGGCA TGACCGAGAA GGTCAAGCAC AAGGCGTATC CCTCGAAGGA ATGGGGCGGC ATGATCTGGG CGTACATGGG TCCGCAGGAC ACCATTCCCG AATTCGTCGC CCCCGCCTGG GCTCCGACCG AGGACACCCG AGTCAGCATC GCGAAGGCGC TGCTGCCGTG CAATTGGGCC CAGATCCTTG AGGGCGCGAT TGACTCCGCA CATAGCTCGA GCCTGCACTC GTCCGATTTC GTGCCGGCCC GCGTCGGCGG GGGCGAGGCA ACGTCGAAAA ACTGGCTGCG TCCGTCCACC GACAAGGCAC CGCGCCTGCA GGTCGAGCGC ACCGAATATG GGTTCCGCTA TGCTGCGCTG CGCCGCCCAA TCTTCAACGC CAACACGCAC GACTACGTGC GCTCGACGGT GTTCGTTGCA CCCGGCATCG TGCTGATTCC GCCCAACAAC CTGTATAACG TCGCCAACAT CAACGTGCCG ATGGACGACA CGAATACGGC GTTCTACTTC ATCGCGTGGG GCGATCCCGC GACGACCCCG GAAACCGAAA CCTGGCGCAA GTTCCTCCAT CAACAGATCG GCCCGGATCT GGACGAGCGC TACCGTCCGC TGCGCAATCA CGAGAACCGC TTCTGGCAAG ACCGGCAGGC CATGAAGGCT GGCAATTTCA CCGGCATCAC GGGCTTCCCG AACCAGGACA TCGCCATGTG GGTCACGATG GGTCCGATCG CCAATCGTTC GGACGAGCGT CTGGGCGCGA GCGATCTCGC CATTGTCGAG TTCCGTCGCC GCATGCTCGA TGCCCTCGCG GAATTCGAGC AGGACGCCGA AGCCATCGGT ACCGGCGCGA AGGCGATCCC GCAGACGGTC TGTTCGTATC AGGCAGTGGT GCCGAAGGAG ACCGACTGGC GTGCGTACGC CGCCCGTTAT GTCAGCGCGA AGCATGCCCT GCCGGAAGAC GAGCCCGCTG CGCTCGCGAC CGACTATCAG GTCAGGCAAT AA
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Protein sequence | MLTHEENELL CRVEGDAPMG KLMRQHWTPV CLIEEVSEPD GAPVKARVFG EDLVVFRDNE GRVGVMGEYC PHRRASLVYG RNEDGGLRCL YHGWKFDVLG NVLEMVSEPA ASGMTEKVKH KAYPSKEWGG MIWAYMGPQD TIPEFVAPAW APTEDTRVSI AKALLPCNWA QILEGAIDSA HSSSLHSSDF VPARVGGGEA TSKNWLRPST DKAPRLQVER TEYGFRYAAL RRPIFNANTH DYVRSTVFVA PGIVLIPPNN LYNVANINVP MDDTNTAFYF IAWGDPATTP ETETWRKFLH QQIGPDLDER YRPLRNHENR FWQDRQAMKA GNFTGITGFP NQDIAMWVTM GPIANRSDER LGASDLAIVE FRRRMLDALA EFEQDAEAIG TGAKAIPQTV CSYQAVVPKE TDWRAYAARY VSAKHALPED EPAALATDYQ VRQ
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