Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4804 |
Symbol | |
ID | 8017516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | - |
Start bp | 139310 |
End bp | 139933 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644828493 |
Product | hypothetical protein |
Protein accession | YP_002979693 |
Protein GI | 241589668 |
COG category | [S] Function unknown |
COG ID | [COG3236] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02464] conserved hypothetical protein, ribA/ribD-fused |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.365912 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACAGG CAATCGAGTT TTATAGAGCG AACGAAAAGC CGTACGGTGC ATTCAGCAAC CTCTACCGGC GCGAAATAGA GATCCATGGT TGCCAGTTCC CGACCGTTGA GCATGCCTAT CAGTCGCTCA AACCTCGTGA TCCGCGTGTA CGCGACTGGT TGATGTCCGC ACCGGCACCG TCGCTAGTTG CGCTCGCTGC CCATGTGCTG CCTTCGGATG ACGTGGATCC GACTCAGATC ATGGGGCGTA CTGCTGATGC CTTGCTCGGG TTCCATACCA GACCTGGTTG GTCGCGATTG CGGTACCCAT GGATGTTGGC CTGCCTGCGA GCAAAATTCG AGCAGCATGC CGACCTGCGA GAACTGCTGC TGGCTACCCA CGATAGCCAG ATTATCGAGG CAGGAAGGAT TGATGATGAT GCCGGTCGCC GTTGGGGAAT CGTGAATGGT CGAGGGCATA ACTACCTTGG ACGGATGCTC ATGCGTGTTC GCTCCCAAAT GGCCGGAACC ACACTGGAAG ACGCCGATCT GGACACCCGT CTTCAGGATG GGCATGCGCC TTTGTGTGCG GTGCTGAACG GCATGATTAC AACCTGCGAT CGCGTCGCCC CGCATATCGA CTAG
|
Protein sequence | MQQAIEFYRA NEKPYGAFSN LYRREIEIHG CQFPTVEHAY QSLKPRDPRV RDWLMSAPAP SLVALAAHVL PSDDVDPTQI MGRTADALLG FHTRPGWSRL RYPWMLACLR AKFEQHADLR ELLLATHDSQ IIEAGRIDDD AGRRWGIVNG RGHNYLGRML MRVRSQMAGT TLEDADLDTR LQDGHAPLCA VLNGMITTCD RVAPHID
|
| |