Gene Rpic12D_4746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4746 
Symbol 
ID8017321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp90303 
End bp90623 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content52% 
IMG OID644828435 
Producttype IV secretory pathway VirB3 family protein 
Protein accessionYP_002979635 
Protein GI241589610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.276825 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACG AACCACGTAC TACAGTAATC CACCCCTCAC TGATGAGAGT TCAGACGATC 
GGAGGCGTCG AGCGGCGCCT TGCGATCGTT CACATCTCCA TCGCAGTCGC AATGCTGGGG
GTGTGGCGTA TCTGGTTGTA CTTGCCAGTC TTTGTTCTTC TCCATCTCTT TCTCGTTTGG
CTTACCAAGC GAGACGAGAA CATCTACCAG ATCTACACGC AGTACAGCAA ACAGTCCGAT
ATCTATGACC CGTGGGTCCG GATCGATCGG AAGTCGAAAA TCAAGCGGCC GCATGGCTTT
GGGCGTGACA TCCTATGTTG A
 
Protein sequence
MDYEPRTTVI HPSLMRVQTI GGVERRLAIV HISIAVAMLG VWRIWLYLPV FVLLHLFLVW 
LTKRDENIYQ IYTQYSKQSD IYDPWVRIDR KSKIKRPHGF GRDILC