| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4722 |
|---|
| Symbol | |
|---|
| ID | 8017299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012855 |
|---|
| Strand | + |
|---|
| Start bp | 64472 |
|---|
| End bp | 66556 |
|---|
| Gene Length | 2085 bp |
|---|
| Protein Length | 694 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644828413 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002979613 |
|---|
| Protein GI | 241589588 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.224738 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0942649 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGCA AACTTCCAGT TCGTCCCATT CCGTTTCCCG ACGAGTCACC CGCGGGGTAC
TTGATACGCA TCGCCGAAGG AAATGGGTTT CCGAGCGTGA CCGCGATGAT TGACGGTCAT
TTTGCTGGCA AGGCGGATGA GGGGTGGATC ACAGCGGCCT ATACGCGCGC GGATCGCTAC
GCAGAGATTC TCCAGTTGTG TGGAGTCGGC GATCCGAATG CCCTCTCATT GAGCTTTGAG
CGTGTGGGGC CCACCGCGGA AACCCCGCGA CTGATTGATG GTGTCCCGTA TGGAGAGCGA
TTCTTCTCCG AGGACTGCCG CGCATACTGC CCAATCTGCC TTGCCGAGCA GCGCTATTTC
CGGAAGCACT GGGCGCTCGA ACCTTACTTG GTATGCCAAG TGCATTCGGT GTACATGCTA
CGAGACTGCC ACGCATGCAA GAAGGCACTG TCTCCTCTGC GTGGTTCGCT TTGCACTTGC
AGGTGCGGAG CCAATCTTGC CGATGCCCAA CCGGTGCTGG CCGATAAGTC GGCCGTAGAC
TGGTGGATGG GCGAGATGCG CGCTGGGGAG CCGCGAGCTG GCGAGGCTGC GGCGTGTGTC
GCTGCTCTCT TTGCGCTGGA GCACCGTGAT GGTTTCTTGG AGTTGCTCAG CAGCGCGCGC
CGATGGGGCG AGGAGGGCGT TGTGTCAACC GAGGTCCAAG CGCTAGTGCA TAACTCGCCC
TGGCACCCGC GTATCACGCT GCTTCCCCTC CTGGAGGCGG CATCCAATAC GGTACGGGCG
TTGGCACTGG AGATTCTTCG CTCGACATCA GGCGAGAGGT CGGTCGGCGC TGACCAATGC
GAACGAAGAT TATCAAGCAA GCAGATCCAG CTCGCTCTCG GACTTAGTGC CAGTCAGTTG
ACGAAGCTGG AGAGAGATGG AGTCTTGGAA GCATATCAAC TGAAAATCGG CAGGGGCGGA
TACAGCGCCG TCGCGGCGAA CGCAATGCTG AGCGCCTTGA CCGCAAACCT GGCCGAGTCG
ACCTGCGCTT CGCGGGCTGT CACGCGCGGT GTGGCATCGG TACTCAGGGC GATTACCGAA
GGGCGCGAGC ACAGCGCTGG ATATGATTTG AGCGCCGGGC TCAGCAGTCT TCGTTCCGTC
CATGCGACGC CACGGAATCC GGCCCCTGAC AGCACCGATG AGATCGGCGT CGAAAAGGTC
GCCGAAATCC TGGGCACCTA TCCTGAGGTT GTTCGCTTTC TTGCAAGGGC GGGATGGCTT
GAGTATCGGG ATAGGGACGG AGCCAATCGG AAGCGGCTTG TAACCAGTCA AGGCGTGGTC
GAGCGTTTCG CTCGGAAGTA TGTTTTTGCC GGAGAGGTCG CCAAGCGCGC CAATACCGGT
GTAACCAGCA CGGCGGAAAG GCTGATGGCG CTTGGTGTGC CAGCCGTTGC GGGTCCAAAA
ATTGATGGCA GTCTCGTCTA CATGTTCGAG CGAGACCGCG TTGATCGCCT TGATCTCGAC
ACGTTGCGTA GCTTGAAGGG GTACCCGACG TCTACGGGGC GTAAGCCGGC TGGCGAAGGC
GTCAAGAGAG AACGCTTAGA GATGCCTCTT GCAGACGCTG CGGAGCTGAT CGGCGTCAGC
GTCCAGACCG CCAAGCGCCT GGTGGTGGAC CATCATCTGC GGGAAGTGAA GGGCCTATCC
AGGTCTGTGC TGGTGACAAG GCGATCCGTA CAACGCTTCA AGGCAATGCT GGATGACCCG
GAGCTCGTGC CCGTAGAAGC CGTCTCGGCA ATCCTTGGTG TGGGAAAAAG GGCGCTGGAA
GTGACATACA TCCAGTCCGG GCTTCTTCCT GTGGTGAATC TGACGGTCTC GCGACGTATT
CACCGTGCGG ACATTGAACG CCTGCAAGAA ATGCGGGCGG AGTACCTCAC TGCGGAGGAG
GCTGGCGGCT TGCTCGGAAG CCACCGGGGT CACCTCCCCA ATCTGGAGAG CCGCGGTGAG
ATCCAGTCGG TGACGTTCGG GAAAGCGCGT AGCGTCAAGT TCTACGCGCT CGCGGACATT
CGCAAACTGG AGGGGGTAGG AGTCCGGCCA ACCGCCGTGA GTTAG
|
|---|
| Protein sequence | MGRKLPVRPI PFPDESPAGY LIRIAEGNGF PSVTAMIDGH FAGKADEGWI TAAYTRADRY
AEILQLCGVG DPNALSLSFE RVGPTAETPR LIDGVPYGER FFSEDCRAYC PICLAEQRYF
RKHWALEPYL VCQVHSVYML RDCHACKKAL SPLRGSLCTC RCGANLADAQ PVLADKSAVD
WWMGEMRAGE PRAGEAAACV AALFALEHRD GFLELLSSAR RWGEEGVVST EVQALVHNSP
WHPRITLLPL LEAASNTVRA LALEILRSTS GERSVGADQC ERRLSSKQIQ LALGLSASQL
TKLERDGVLE AYQLKIGRGG YSAVAANAML SALTANLAES TCASRAVTRG VASVLRAITE
GREHSAGYDL SAGLSSLRSV HATPRNPAPD STDEIGVEKV AEILGTYPEV VRFLARAGWL
EYRDRDGANR KRLVTSQGVV ERFARKYVFA GEVAKRANTG VTSTAERLMA LGVPAVAGPK
IDGSLVYMFE RDRVDRLDLD TLRSLKGYPT STGRKPAGEG VKRERLEMPL ADAAELIGVS
VQTAKRLVVD HHLREVKGLS RSVLVTRRSV QRFKAMLDDP ELVPVEAVSA ILGVGKRALE
VTYIQSGLLP VVNLTVSRRI HRADIERLQE MRAEYLTAEE AGGLLGSHRG HLPNLESRGE
IQSVTFGKAR SVKFYALADI RKLEGVGVRP TAVS
|
|---|
| |