Gene Rpic12D_4564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4564 
Symbol 
ID8022252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp1203333 
End bp1203863 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content64% 
IMG OID644833337 
Producthypothetical protein 
Protein accessionYP_002984477 
Protein GI241666118 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.256174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGA AGCTGATCGT GTACTACTCG CGCACCGGCA CGGCACGTCA GGTAGCCGAG 
CAGATGGCTG CGCAGAGCGG ATGGCAGCTT GCCGAGGTGA CGGACGAGCA TCCGCGCGCC
GGCTTCCTGG GAGATGCGCG CTGCGTCCTC GAAACGGTAT TCCATGCGCG CGCCAAGTAT
CGCTATGAAG GTCCGCCGCT TGATGATGTC GAACACGTCA TCGTGATCGC GCCCATCTGG
ATGGGCCACC TGGCTTCGCC CATGCGGGAC TTCCTGGCTG ACCAACTGCC GGGGTCCACG
CACCTGTCCG TGATTTGTGT CATGGCGGCC CGCGGGGCGT TCCGTGCTGT CGAAGAAATC
ATGCGCATCA CGGCCACCAT TCCGGCGCCG GTGCTGGCGC TGTTCCAGCG TGACGTGCTC
AGCGGGCTGT CGCAAGAAGA GATCGCGGGT TTCATCGAAC AGGTGAAGAC TGCCGGCCGG
TGGGAGCAAT CGAGGCAACG TCCGGCCTGG CTGTCGCCAA CGGAAGCCTG A
 
Protein sequence
MEKKLIVYYS RTGTARQVAE QMAAQSGWQL AEVTDEHPRA GFLGDARCVL ETVFHARAKY 
RYEGPPLDDV EHVIVIAPIW MGHLASPMRD FLADQLPGST HLSVICVMAA RGAFRAVEEI
MRITATIPAP VLALFQRDVL SGLSQEEIAG FIEQVKTAGR WEQSRQRPAW LSPTEA