Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4415 |
Symbol | |
ID | 8022103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 1045394 |
End bp | 1047280 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644833189 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_002984329 |
Protein GI | 241665970 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC TCCGCGCAGC GCGCTATCCC AAATGCATCG CCACCGTGTG CCTGTCCGGC ACGCTGCCTG AAAAGCTGGA GGCGGCGGCC GCTGCCGGTT TTGATGGCAT CGAGATCTTC GAAAACGATC TGCTGAACTT CGACGGCTCG CCGGACCGCG TGCGCCAGAT GGCGGCAGAC CTTGGGCTCG CGATCATGCT GTACCAGCCG TTCCGTGACT TCGAAGCCAT GCCGCGTGAG TTGTTCGCCC GAAACCTGGC GCGCGCCGAG CGCAAGTTCG ACGTGATGGC CGAACTGGGC GTCGAGACGG TGCTGGTATG CAGCAACGTG CAGGACATCG CCATCGACGA CCCGGCGCGC GCAGCAGACG ATCTGCGCCA GATGGCGGAA GCTGCGGCCG GGCGTGGGCT GCGTGTGGGC TACGAGGCGC TGGCATGGGG GCGGCACACG CGAACCTGGC GGCAAGCGTG GCAAATCGTG CAGCAGGCTG ACCACCCGGC GCTCGGGCTG ATTCTCGACA GCTTCCATAC GCTGTCGCTG GGCGACACGT TGGATGGCCT CCACAACGTG CCGGCGGACA AGCTCTTCTT CGTGCAGTTT GCCGATGCGC CAAGGCTGTC GATGGACGTA CTGTCCTGGA GCCGGCATCA CCGTAACTTC CCGGGGCAGG GCGACCTGCC GGTGACGGAC TTTGCGCGCG ACTTGCTTGC TGCGGGCTAT ACCGGGCCCT TGTCGCTCGA AGTCTTCAAT GACGATTTCC GCTCCGCGCC CGCGCGGCTC ACGGCGCTGG ATGGCATGCG TTCACTACTC TGGCTGGAGT CCGAAGCGGG CGGGGCAGAA CTGCCGGCCG CAGCTCAATT TGAAGGCGTG GACTTCCTGG AGTTTGCCGT GGATGCCGCG GCAGGGCGGG AGCTTGAAAC GCGCCTGCGT GCGCTGGGTT TTGCCTTTGC CGGGCACCAT CGCTCCAAGG CCGTTGACCT GTATCGGCAA GGCCGCGTCA ACGTGATCCT GAACATGGAG CAGGACAGCG CGGCGTCGGA GCATTTCGAG CTGCACGGGC CGTCTGTCTG CGCGATCGGC CTGAAGGTGG ACGACGCCGA GCGCGCCATG GCACGCGCAC GTGTGCTGTG CGCCCAGGAG TGGCGCGGGC CGGTGGGGCC TGCCGAACGC AGCATTCCCG CGCTGCGGGC CCCCGATGGC ACGCTGCTCT ATCTGATCGA CGACCGCCAA GCCGATCGCA GCATCTACGA AAGCGATTTC GTTCTCCATC CTGGCATGCA GGACGATGCA GCGGGATTGG CATCAATCGA CCACGTCGCG CACGCGCTGC CCGCACATCG GCTCGACAGC TTCGTGCTGT TCTACCGGGC CATCTTCGGC ATGGAAGCCG AACCCGAACA GGAGATTGCC GACCCGTACG GCCTAGTCAA AAGCCGTGCG ATGGTGAGCC CCGACCGCAA CGTGCGGATT CCGCTCAACG TATCGGAGAG CGGGCGCACC GCCACCGGCC GGTTCATTGC CGCCTACGCG GGCTCGGGCG TGCATCACAT TGCCTTCCGC ACCGAGCGGC TGTTCGAAAC GATTGAGGCC ATCGACCGAG GCGCCGCCCA CCTGCAGCAC GTGCCAGAGA ACTACTACGA CGACGTTGCC GCCCGCCTGG GGCTGGACGA TGCGCTGCTC ACCCGCCTGC ACGACGATGG TCTGCTCTAC GACCGCGACC CGCACGGCGA TTTTCTGCAC ACCTACACCG AGCCCTTTCG CGAGCGCTTC TTCTTCGAGC TTGTCCAGCG CAACGGCTAC CTGGGCTACG GCGCGGCAAA CGCCGCTGTG CGCATGGCCG TACAGGCGCA ACTGAGCCGC ACCACCACCA ATACGGCTGA TCACTGA
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Protein sequence | MNSLRAARYP KCIATVCLSG TLPEKLEAAA AAGFDGIEIF ENDLLNFDGS PDRVRQMAAD LGLAIMLYQP FRDFEAMPRE LFARNLARAE RKFDVMAELG VETVLVCSNV QDIAIDDPAR AADDLRQMAE AAAGRGLRVG YEALAWGRHT RTWRQAWQIV QQADHPALGL ILDSFHTLSL GDTLDGLHNV PADKLFFVQF ADAPRLSMDV LSWSRHHRNF PGQGDLPVTD FARDLLAAGY TGPLSLEVFN DDFRSAPARL TALDGMRSLL WLESEAGGAE LPAAAQFEGV DFLEFAVDAA AGRELETRLR ALGFAFAGHH RSKAVDLYRQ GRVNVILNME QDSAASEHFE LHGPSVCAIG LKVDDAERAM ARARVLCAQE WRGPVGPAER SIPALRAPDG TLLYLIDDRQ ADRSIYESDF VLHPGMQDDA AGLASIDHVA HALPAHRLDS FVLFYRAIFG MEAEPEQEIA DPYGLVKSRA MVSPDRNVRI PLNVSESGRT ATGRFIAAYA GSGVHHIAFR TERLFETIEA IDRGAAHLQH VPENYYDDVA ARLGLDDALL TRLHDDGLLY DRDPHGDFLH TYTEPFRERF FFELVQRNGY LGYGAANAAV RMAVQAQLSR TTTNTADH
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