Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4359 |
Symbol | |
ID | 8022047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 982377 |
End bp | 983720 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644833134 |
Product | pilus assembly protein |
Protein accession | YP_002984274 |
Protein GI | 241665915 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4963] Flp pilus assembly protein, ATPase CpaE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTATT TCCTTCTGCA CGGCGGCGCA CGTGGCGGTA AGCAAGGCGA CGCACAGTCG GCAGGCGTAC ACCGCTGGCT GGCCGCGGCA ATTCGCGAGT TGGGCGTGCT GGTGGCCGAA ACCACTGGCC ACGACGCGTT CATCGAGCAG ATTGGCGCAG TGAACCCCGA GGTGGTGTTC GTGCGCTTTG CCTCGTCTCC CACACTGATC GACGTGCCAG ATCAGGACCA GAAGCTGGGC GAGGGCGCCG ACGCGATCAA CGAGGCGATG CAACTGGTCG CGCAACTTGC GCGTCTGTTT CCGGGCTTGC CGCTGGTGGC GGTGGGCTCC GCTGCCGATG GCCGCGCGAT GCTGGCTGCC TTGCGCGCAG GGGTAAAGGA TTTCGTTGAC GTGGACGGCG CGCCGGCCGA GGCTGTGCGC GTCGTGCGTC GACTGCTGGC GGACCGCGCA TCGGCTGAGC CGACCCGCCG TGGCCGCGTG CTGGCCGTGT TGGGCGCGCG CCCCGGCGTG GGCGCCACCA CGTTGGCCAC CAATCTGGCC ACGCTGGTGC GCCGCACGTC GGCCAGCGAT GTGATGCTGC TCGACCTTGG CCAGCCGCTG CGTGATGGCG CCCTATACCT TAACGTGCAA GCCAACTTCC ACTTTGTCGA AGCCGTGCGC AACCTGCGCC GCTTCGACCA GGTGTTTGTG CAGACCGCGC TGTCGCGTCA TCCGAACGGG CTTGCGGTCC TGCCGTTGCC GATCTCGCTA GCCGAGATGC GCGACGTTTC GTTCTCCGAA GCGCTGGGTC TGCTCAACCG CTTGCGCACG TTCTTCGACC TGCAGGTCGT TGACCTGGGT GGCTTTGGCA ACATCGACTT CATCGCACAG ATCATCAAGG CCGCCGACGA TGTGATGCTG GTGACCGAGC AAAGCGTGGG CGCCATCGTG TCGGCGGCTG AACTGATGCA GGAACTCAAG AAGCGCGAGA TTGACCGTGA CCACCTGCAC CTGACCATTT CGAAGTTCGA CGCACGCCTG TCGCTGGACG CAGCGCAGAT CGCCGAGCGG CTGGAGATTC CTTCGGTGCT GACGGTACCG AATCGCCGTG AAGCCCTGGT CATTGCTTCC AACCAGGGCG CGATGCTCGC GGAAACGCAC CCCACCGATG CCTATGTCCG CGCGCTTGCG CAGATTGCCC AGACACTCGG CTATGCCCAG CAGAGCGAGC GCGCGTCTGG CTTGTCGAAC TGGGTGTCTG GCGTGAGTGC TCGACTGGGT GGGCGCTTTG GCGGACGCTC CAAACGCAAG TCGGCAGACG CCAATGAACT GGATATCGGT ACTACCGAAC GGAACGCGAC ATGA
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Protein sequence | MDYFLLHGGA RGGKQGDAQS AGVHRWLAAA IRELGVLVAE TTGHDAFIEQ IGAVNPEVVF VRFASSPTLI DVPDQDQKLG EGADAINEAM QLVAQLARLF PGLPLVAVGS AADGRAMLAA LRAGVKDFVD VDGAPAEAVR VVRRLLADRA SAEPTRRGRV LAVLGARPGV GATTLATNLA TLVRRTSASD VMLLDLGQPL RDGALYLNVQ ANFHFVEAVR NLRRFDQVFV QTALSRHPNG LAVLPLPISL AEMRDVSFSE ALGLLNRLRT FFDLQVVDLG GFGNIDFIAQ IIKAADDVML VTEQSVGAIV SAAELMQELK KREIDRDHLH LTISKFDARL SLDAAQIAER LEIPSVLTVP NRREALVIAS NQGAMLAETH PTDAYVRALA QIAQTLGYAQ QSERASGLSN WVSGVSARLG GRFGGRSKRK SADANELDIG TTERNAT
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