Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4234 |
Symbol | |
ID | 8021922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 835698 |
End bp | 836747 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644833012 |
Product | putative transmembrane protein |
Protein accession | YP_002984152 |
Protein GI | 241665793 |
COG category | [S] Function unknown |
COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGT CCAGTTTCAT CAAGAAGCAG TTCATCGACA TCCTGCAATG GACGGAGAGC GAAGACGGCG TGCTCGCCTG GCGCTATCCG ATGCAGGACA TGGAAATCCA GAACGGCGGC ACCCTGGTCG TGCGCGACTC GCAGATGGCG ATGTTCGTCA ACGAAGGCCA GATCGCCGAC GTATTTGGCG CCGGCACCTT CAAGCTGACC ACGCAGACGC TGCCCGTTCT CACGTACCTG AAGAACTGGG ACAAGCTGTT CGAGTCCCCC TTCAAGTCCG ACGTCTACTA CTTCAGCACG CGCCAGCAAC TGGGCCGCCG CTGGGGTACG CCGCAGCCCG TGACGGTGCG CGACAAGGAT TTCGGCATGA TCCGCCTGCG CGCCTTTGGC GTGTACGCCT ACCACGTGGC CGATCCGAAG CTCTTCTACC AGCAGGTGAG CGGCACACGC GACATCTACA CCGTGGATGA AGTCGAGGCG CAACTCGCCC CCGTCATCAT GGGTGCGATG GCGACGGCGT TTGGCGAATC CGGCGTGCCC TTCCTGGACC TGGCCGCCAA CCAGATGCTG ATGTCGAACA AGGTGCGCGA GGCGCTGCTG CCGCAGTTCA CGCAGTACGG CCTGGCGCTC GACAGCTTCC AGGTGTCCAG CGTCACGCTG CCGGACGAAC TGCAGGCCGC GCTGGACCGC CGGATCAGCA TGGACATGAC CGGCGACATG CAGCGCTTCA CGCAATACCA GACGGCCGAA TCGCTGCCGC TGGCGGCACG CAACGAAGGC GGCATCGCCG GTACGGGTGC GGGTTTGGCG GCAGGGCTGG CAATGGGCCA GGCGATGGCC GACAGCCTGC GTACCGCTGT GCAGGGCAAC GCTGGCGGTG CGGCTGCTCC TGCAGCGCAA TCTGCCGCCG CCGTCCCAGC TGCTCCGGCA GCGGACGACC CCACCGCACG CCTGGCCAAG CTCAAGGAAC TGCTCGACAA GGGCCTCATC ACGCAAGCGG ACTTCGATGC CGGCAAGGCT GCCGTGCTGA AGGCGCTGAC CGGAGGCTGA
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Protein sequence | MSLSSFIKKQ FIDILQWTES EDGVLAWRYP MQDMEIQNGG TLVVRDSQMA MFVNEGQIAD VFGAGTFKLT TQTLPVLTYL KNWDKLFESP FKSDVYYFST RQQLGRRWGT PQPVTVRDKD FGMIRLRAFG VYAYHVADPK LFYQQVSGTR DIYTVDEVEA QLAPVIMGAM ATAFGESGVP FLDLAANQML MSNKVREALL PQFTQYGLAL DSFQVSSVTL PDELQAALDR RISMDMTGDM QRFTQYQTAE SLPLAARNEG GIAGTGAGLA AGLAMGQAMA DSLRTAVQGN AGGAAAPAAQ SAAAVPAAPA ADDPTARLAK LKELLDKGLI TQADFDAGKA AVLKALTGG
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