Gene Rpic12D_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4123 
Symbol 
ID8021811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp722452 
End bp723348 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content63% 
IMG OID644832904 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002984044 
Protein GI241665685 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACTG AAACCCTTTC CATGCCGGCC ACCACCGACA TCAGCAACCG CGCGCCCGTC 
TACAGCACGC CCGTGGCGTT CGAGCGCATC GGCGTGGTGG AAAAACCCCT CTCCGTTGCG
GAGCGTTTGT ACGAACAGGC ATGGCTGCGC AAGGTCGTCA TCCTCGTCGT GCTCGCACTG
GTGTGGGAAG GCGGGGCGCG CTGGCTCGAC AACCCGCTGT TGCTTCCGAC TTTTTCCGAC
ACCGTGCAGG CGCTGTGGGC AGGGTTGGCG AGCGGCACGC TGTTTGCTCG CATCGGCACG
TCGATGCAAA CGCTGCTTGC AGGCTACGCG CTCGGCTTGG CGTTGTCCTG CGCGCTGGTC
GTGCTCGGCA TCAGCAACCG GCTCGGGCAG GACTTCCTGG AAACGCTCAC CGCCATGTTC
AACCCGCTGC CGGCCATTGC GCTGCTGCCA ATCGCCCTCG TGTGGTTCGG CCTGGGCAAC
GGCAGCCTGA TCTTCGTGAT CGTGCATTCG GTGGTGTGGG CGGTGTCGCT CAACACGCAT
GCCGGTTTCC TGTCGGTATC GAACACGCTG CGCATGGTGG GCCGCAACTA CGGGCTATCC
GGCATGGGAT ACCTGACGAA GATCCTGATC CCCGCCGCAT TCCCGTCCAT CCTCACTGGC
CTGAAGATCG GCTGGGCCTT CGCATGGCGC ACGTTGATCG CCTCGGAACT GGTGTTTGGC
GTCAGCTCCG GCCAGGGCGG CCTCGGCTGG TACATCTACG AGAACAAGAA CCAACTGCAA
ATTCCCGAAG TGTTCGCCGG CCTGCTGACG GTGATCATCA TCGGCCTGCT GGTAGAGAAC
CTCGTGTTCC GTACGCTTGA AGCCCGTACC GTCAAGCGCT GGGGCATGCA GAACTAA
 
Protein sequence
MQTETLSMPA TTDISNRAPV YSTPVAFERI GVVEKPLSVA ERLYEQAWLR KVVILVVLAL 
VWEGGARWLD NPLLLPTFSD TVQALWAGLA SGTLFARIGT SMQTLLAGYA LGLALSCALV
VLGISNRLGQ DFLETLTAMF NPLPAIALLP IALVWFGLGN GSLIFVIVHS VVWAVSLNTH
AGFLSVSNTL RMVGRNYGLS GMGYLTKILI PAAFPSILTG LKIGWAFAWR TLIASELVFG
VSSGQGGLGW YIYENKNQLQ IPEVFAGLLT VIIIGLLVEN LVFRTLEART VKRWGMQN