Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4103 |
Symbol | |
ID | 8021791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 702013 |
End bp | 703029 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644832884 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002984024 |
Protein GI | 241665665 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.309403 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAAAC CTCCGCATTC CCACTTCGAT ACGTCTGCGC TGCCGCGCGA GCATCAATTT GCGGCGTGGC GGGATGCCAT CAACGTGCTG TTCGATTCGC GCTCCGCCGC GCCGCAGTCG CATGGCTTTC AGGCCAGCGT CGACGCCTAT CTGTGCGGCG AGACAGGTGT GGGCATGCTC AGCGCCCAGG CACAGCACTA TGACCGGTCC CGCTCCAAGC TGGGGCGCGA CGGCATGGAC GTCTACGTGC TCCAGTACTA CCTGGAAGGC AGTTGCGGAC AGCGCGACGG CGCAAGCGAC AGCGCCACGC GCCCCGGCGA TCTGTTCATC GTCGACGCAG CCCAGCCGCT CGCCACAAGC ACGACCGACA GCCGCTTCCT GAGCCTGGCC GTGCCACGGC GCCTGCTGGC ACCGCTGCTG CGCGCACCCG ACGAACTGAG CATGCGCGTG CTGCGCGGCG GTGCTCCGAT GGTCGGGCTG CTGCGCGATC ACCTGTGTTC GCTCTATCAC TCGGTCGGGA AATTGAGCGA TGCCGAAGCA CAGGCCGTCA TCCCGGGCAC CCTGCAACTG GCTGCGGCCG CCATCAACTG CCAGGTGACC GAAGCCAATG CGCCGGCCGT GAGGGAAAGC CTGTTTGCCT CGGTCTGCCG GCATGTGCAG CACAATCTGT CCGACCTGGC GCTTTCGCCC GAAGGCGTGT CGGTGCAGTT CGGCATCTCG CGTGCCACGC TGTACCGGCT GTTCGAGCGC GAAGGCGGCT TCTTCAACTA CCTGCGCATG CAGCGCCTGC GGCAGTGCCA CGCGATCCTG GCCGACCGAT CGCAGACGCA CCGTTCGGTA GCCGAAATCG CGCAGACCTA CGGCTTTTCC GACGCCTCGA ACTTTGCGCG TGCGTACCGG CGCGCGACGG GCATGTCGCC CCGCGAGACG CGCATGCTGG CCGTCGAAGG GCGCGCCGCA GCCATGCCGT TCGTGCAGCA CAAGGACTGG CGCACCTGGG TCATGCAGAT GCGCTGA
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Protein sequence | MSKPPHSHFD TSALPREHQF AAWRDAINVL FDSRSAAPQS HGFQASVDAY LCGETGVGML SAQAQHYDRS RSKLGRDGMD VYVLQYYLEG SCGQRDGASD SATRPGDLFI VDAAQPLATS TTDSRFLSLA VPRRLLAPLL RAPDELSMRV LRGGAPMVGL LRDHLCSLYH SVGKLSDAEA QAVIPGTLQL AAAAINCQVT EANAPAVRES LFASVCRHVQ HNLSDLALSP EGVSVQFGIS RATLYRLFER EGGFFNYLRM QRLRQCHAIL ADRSQTHRSV AEIAQTYGFS DASNFARAYR RATGMSPRET RMLAVEGRAA AMPFVQHKDW RTWVMQMR
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