Gene Rpic12D_4096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4096 
Symbol 
ID8021784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp693482 
End bp694180 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID644832877 
ProductDimethylmenaquinone methyltransferase 
Protein accessionYP_002984017 
Protein GI241665658 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID[TIGR01935] RraA famliy 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.189235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCC CTTCGCACAA CACTTCCGCC ATCGTTCGCG ATATCGAACG CGTTTCCCCC 
GCGCTGGTCG AGGCGGCTGC CCGCTTTCAG GCGGCCATCC TGGCCGACGT TGCCGGCCGC
CGCGGCACCT TGAACTGTCG CGTCAAACCG CTCGCGCCGA CCATGAAAGT GGCCGGGCCG
GCTGTAACGG TCGAAGTTCG CCCGGGCGAC AACCTTGCCA TCCATGCCGC CCTGGCGGTT
GCCAAGCCCG GCGATGTGAT CGTGGTGGAC GGCAAGGGTG ACCAGAGTTG CGCGCTGATC
GGCGAGATCA TGGCCACGCA GGCGCAGGCC ACTGGCATCG CCGGGTTTGT CATCGATGGC
GCGGTGCGCG ATTCGCACGA GTTGGCGAAT GGCACGTTCC CGATTTTCTC TGCCGGCTTG
AACCCGTGCG GGCCGACCAA GAGCGTGGCT GGCCGCGTGA ACCTGCCCGT GTCCGCCGCC
GGCGCAACGG TGCATCCGGG GGACCTGGTG GTGGGCGATG CAGATGGCGT GGTCGTGATC
CCGCGTGCCG ACGTTGAGCG CATTCTCGTG CTCGCACAGA AAAAGGTGGA TGCCGAAGCG
GCCCGCATTG CGGCGATCCG CAAGGGCGAT ACGCGCCCCG GCTGGCTCGA GAAGGAACTG
CGCGCGGCGG GCATGCTGGC TGAAGGCGAG GCACTGTAA
 
Protein sequence
MSTPSHNTSA IVRDIERVSP ALVEAAARFQ AAILADVAGR RGTLNCRVKP LAPTMKVAGP 
AVTVEVRPGD NLAIHAALAV AKPGDVIVVD GKGDQSCALI GEIMATQAQA TGIAGFVIDG
AVRDSHELAN GTFPIFSAGL NPCGPTKSVA GRVNLPVSAA GATVHPGDLV VGDADGVVVI
PRADVERILV LAQKKVDAEA ARIAAIRKGD TRPGWLEKEL RAAGMLAEGE AL