Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4018 |
Symbol | |
ID | 8021706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | + |
Start bp | 595373 |
End bp | 596155 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832800 |
Product | protein of unknown function DUF81 |
Protein accession | YP_002983940 |
Protein GI | 241665581 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.006188 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTCTC ACGCGGTTTT CACGGGCCTG ATCAATTTGC TGCTCGGCAT GGGTCTCGGC GTGGCGGGCG GTTTGCTCGG CATTGGAGGC GGGCTCATCG CCATTCCTCT GCTCGGCTAT CTGTACGGAA TGGACCAGCA CTTGGCGCAG GGCACGGCGC TGGTGATGAT TGCGCCCAAT GTGCTGATCG GCTTCTGGCG GTATCACCAG CGGCATCCGG TGCATGTGCG TTCCGTCGCG CTGATCTGCG TGTTCTCGAT GGGGGCGACC TACGTTGCCG CGCGCTTTGC GGCGGGGCTG GACGCCAACC TGCTGCATAC GGCGTTTGCC GTATTCCTGA TCGTGCTCGC CGTGTACTTT GCCTCGCAGC TCAAGGAGAA GCCGAATGCC GCTGGTGCTG CGCACGCTGT GCCGCACACC ATGCCGGCCG CCGCGCTGCC GTTGATGGGC ATCGCCAGCG GCGCGATGTC GGGCATCTTC ACGGTGGGGG GCGGGCTGGT GGTGGTGTCG GCGCTGGTGA CGTTCTTCGG CATGCCGCAG ACGCGCGCGC AGGGCATGGC GCTCGCGCTG GTGGTGCCAG GCTCGCTCAT TGCACTCGCC GCGTATGCGC ATGCGGGCCA CGTGGATTGG GGTACGGGCA TTCCGCTGGC GGCCGGCGGT GTTGTCAGCG TGTCGTGGGG TGTGGCCCTG GCATATCGGT TTTCAGCGCG GCGTTTGCGG CTGGCGTTCT GCGCAGTGCT GCTTGGTACG GCGCTGATGA TGTTGCTGGT CAAGCCAGCC TGA
|
Protein sequence | MTSHAVFTGL INLLLGMGLG VAGGLLGIGG GLIAIPLLGY LYGMDQHLAQ GTALVMIAPN VLIGFWRYHQ RHPVHVRSVA LICVFSMGAT YVAARFAAGL DANLLHTAFA VFLIVLAVYF ASQLKEKPNA AGAAHAVPHT MPAAALPLMG IASGAMSGIF TVGGGLVVVS ALVTFFGMPQ TRAQGMALAL VVPGSLIALA AYAHAGHVDW GTGIPLAAGG VVSVSWGVAL AYRFSARRLR LAFCAVLLGT ALMMLLVKPA
|
| |