Gene Rpic12D_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3946 
Symbol 
ID8021634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp524946 
End bp525530 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content65% 
IMG OID644832735 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002983875 
Protein GI241665516 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0859911 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG AACGCACCCG GCGCAAAACC GCACTCGCTA CGCGCGCCTC CGGCCACCAC 
GCCGTCGTGC AGGCGCTGGG CGACCAACAT ATCGGCCTGG AAGCCCGCGC GCATGTGGAC
GACCACATGG ACGTGAAGAT CTGGCTGCGC CTGTTGGCCT GCAGTACGCA GATCGAACAG
CAGATCCGCC AGCGCCTGCG CACGCGTTTC AACACCACGT TGCCGCGCTT CGACTATCTG
GCACAACTCG ACAGGCATCC GGACGGCCTG CGCATGAACG TGCTGTCGCG CTACCTGATG
GTGACCGGCG GCAACGTCAC CGGCCTGACC GACCAGCTGG AGAAGGAAGG GCTTGTCAAA
CGCGAGGCGG ATCCGGATGA TCGCCGGTCC TTTCGCGTGC TGCTGACCGA CGCCGGCCGC
CGCCACTTTG CCGAGATGGC CGCCGAGCAC GAACGCTGGC TGATCGAGAT GTTCGACGGC
CTTGGCATTG CCAACAAAGA CGCGCTCTAT GCGCAGCTCG GCCACCTGCG CGTTCATCTC
GCGCAGCGCG AGCAAGAGCT GGACGCCCGC GAAGATCAAC CCTGA
 
Protein sequence
MSTERTRRKT ALATRASGHH AVVQALGDQH IGLEARAHVD DHMDVKIWLR LLACSTQIEQ 
QIRQRLRTRF NTTLPRFDYL AQLDRHPDGL RMNVLSRYLM VTGGNVTGLT DQLEKEGLVK
READPDDRRS FRVLLTDAGR RHFAEMAAEH ERWLIEMFDG LGIANKDALY AQLGHLRVHL
AQREQELDAR EDQP