| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3624 |
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| Symbol | |
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| ID | 8021311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 186040 |
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| End bp | 187833 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832415 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002983556 |
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| Protein GI | 241665197 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAT CCCCTGCCTT TCACACATCG GACCTCCCCA GCCGGCTCGA CCGCCTGCCC
TGGAGCCGAT TCCACACGCG CGTGGTGGTG GCGCTGGGCA TTACCTGGCT GCTCGACGGG
CTCGAGGTCA CGCTGGCAGG GGCTGTGGCC GGCGCGCTCA AGCAAAGCCC CGCCCTGCAA
CTGACCAACG CGCAGATCGG CATGGCCAGC AGCGCATACC TGGTGGGCGC CGTGCTCGGC
GCGCTGGTCT TCGGATGGCT GACGGATCGG CTCGGGCGGC GCAAGCTGTT CTTCATCACG
CTGGGTGTGT ACATCTGCGC CACGCTGGCC ACGGCGTTCT CCTGGAATTT CGCCAGCCTC
GTGCTCTTTC GCGTGCTGAC GGGCGCGGGC ATCGGCGGCG AATACGCGGC CATCAACTCG
ACCATCCAGG AGCTGACACC GGCGCGCGTG CGCGGCTGGA CGGACCTCGC CATCAACGGC
ACGTTCTGGA TCGGTGCGGC ACTGGGCGCC GGAGCATCGC TGTGGCTACT CGACCCCGCG
CACGTGAGCG CCGATACGGG CTGGCGGCTG TGCTTTTTGA TCGGCGCGGC GCTCGGGCTC
ATCATTCTCG TCATGCGCTT CTGGATTCCG GAAAGCCCGC GCTGGCTGCT CACGCGTGGC
CGGCATGAGG AGGCGCGCGC CATCGTCCGC GACATCGAAG AGGAGATCAC CGCGTGCGGT
CATCGGTTTG ATACCGCACC GCTGGCCACG CTGCGCCTGC GTCACCGCGG CCATCCTGGC
CTGGCGGACG TGGCGCGCGT ACTGTTCGTG CAGCACCGGC GGCGCGCGCT GGTGGGCCTG
GCCCTGATGG CGGCGCAGGC CTTTTTCTAT AACGCGATCT TTTTCACCTA CGCGCTGGTA
CTGACCGATT TCTACGACGT GCCCGCAACA CGGGTCGGCA CGTATCTGCT GCCATTTGCG
CTGGGCAACT TCCTGGGCCC GCTGCTGCTA GGCAGGTTGT TTGACAGACT CGGCCGCCGC
ACGATGATTG CGGCCACCTA CGCGATCAGT GGCGTGCTGC TGCTCGCCAG CGGGGCGCTG
TTCAAGGCCG GCGTGCTCGA TGGCACCACG CAGACGCTCG CATGGACGGT GGTGTTCTTC
TTCGCCTCCG CGGCAGCAAG CTCGGCCTAC CTGACGGTGA GCGAGACGTT TCCGCTGGAA
GTGCGCGCGC TGGCCATTGC GTTGTTCTAC GCAGTGGGCA CCGGCCTGGG TGGGGTGGCA
GGGCCGGCAC TGTTCGGCTG GCTGATCGAC ACGCATTCGC GTGGCGCCCT TTTTGGCGGC
TACGCGTTTG GCGCGGTGCT GATGCTGCTG GCTGCCGCAG TGCAGGCGCG CTGGGGCACC
GCAGCGGAGC GCAAGCCGCT CGAACATGTG GCCGCGCCGC TGCGATGGAT GACGGCCCGG
CTTGACCAGC GCCAAGTACG CGCCACCTGC GTCGCATATA CTGCGCGCTG CCATTTCCTG
TTTTGCCGGA GACACTCATG CCTGACGCGA CGTACGACAA CCAGAACATC TTCGCCAAGA
TCCTGCGCGG CGAGCTGCCC TGCATCAAGG TGTACGAAGA CGAGCACACC ATCGCCTTCA
TGGACATCAT GCCGCAGGCC GACGGCCATG TTCTCGTGCT GCCCAAGGAG GGCGCGGCAC
TGTTGTTCGA CCTGTCCGAC GAAGCCGCAT CGGCCGCCAT CCGCACCACG CGCAAGCTGG
CCCGCGCCGT GCGCGACGCG TTCGCGCCGC CGGGCGTTGC CGTCTTCCAG CTGA
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| Protein sequence | MPESPAFHTS DLPSRLDRLP WSRFHTRVVV ALGITWLLDG LEVTLAGAVA GALKQSPALQ
LTNAQIGMAS SAYLVGAVLG ALVFGWLTDR LGRRKLFFIT LGVYICATLA TAFSWNFASL
VLFRVLTGAG IGGEYAAINS TIQELTPARV RGWTDLAING TFWIGAALGA GASLWLLDPA
HVSADTGWRL CFLIGAALGL IILVMRFWIP ESPRWLLTRG RHEEARAIVR DIEEEITACG
HRFDTAPLAT LRLRHRGHPG LADVARVLFV QHRRRALVGL ALMAAQAFFY NAIFFTYALV
LTDFYDVPAT RVGTYLLPFA LGNFLGPLLL GRLFDRLGRR TMIAATYAIS GVLLLASGAL
FKAGVLDGTT QTLAWTVVFF FASAAASSAY LTVSETFPLE VRALAIALFY AVGTGLGGVA
GPALFGWLID THSRGALFGG YAFGAVLMLL AAAVQARWGT AAERKPLEHV AAPLRWMTAR
LDQRQVRATC VAYTARCHFL FCRRHSCLTR RTTTRTSSPR SCAASCPASR CTKTSTPSPS
WTSCRRPTAM FSCCPRRARH CCSTCPTKPH RPPSAPRASW PAPCATRSRR RALPSSS
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