Gene Rpic12D_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3479 
Symbol 
ID8021165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp22703 
End bp23200 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content65% 
IMG OID644832272 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002983414 
Protein GI241665055 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.891709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.101861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTG AACGCGAACG CTTCGCCGTG ATGCACCAGT TCGGGCGCAC CTATCGTGCG 
TTCATGGCCG CCTTCGAGGC ACATGTCGGC CAGCCCATGC CGCGCTGGCG TATCCTGCTC
GCTCTGCACG ACCACGCAGG CGGCGGCATG GCGCAGAAAC AGCTGGCCGA GCGCCTGCAG
ATGGACCCCG GCGCGCTCAC CCGCCAGCTC AAGGTACTCG ATCAGCTTGG CTGGATCGAA
CGCACCACCG ACGCACGCGA CAATCGCCTG ACCAACGTAT CGTTGTCCGA TGCCGGCCTT
GCCGTGGTGC TCGACTGCAT GCCCCGCCGC ATCGCGTTCA TCAATGCCAC GCTCGATGGC
TTGCCGGATG ATCTCGTGCG CGCACTGTCC GAGGCACTGG CGCAAATCGA AACACGCATC
GCGGAGGTTC CGAGCCTTGC CTCGGCCGAT GCCAAGTCTT CCCAAACCAA GGCCCCCCGC
CAGCCAGAAG CGCGCTGA
 
Protein sequence
MTSERERFAV MHQFGRTYRA FMAAFEAHVG QPMPRWRILL ALHDHAGGGM AQKQLAERLQ 
MDPGALTRQL KVLDQLGWIE RTTDARDNRL TNVSLSDAGL AVVLDCMPRR IAFINATLDG
LPDDLVRALS EALAQIETRI AEVPSLASAD AKSSQTKAPR QPEAR